RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SHC4Q6S5L8 630 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 GABBR1Q9UBS5 961 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.02■□□□□ 0.64
COL5A3-201ENST00000264828 LCMT1Q9UIC8 334 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 AXIN2Q9Y2T1 843 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 FAM95CA0A1B0GW59 222 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 TSPY1Q01534 308 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 COG1Q8WTW3 980 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 DPF2Q92785 391 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 ZCWPW1Q9H0M4 648 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 PRPF4O43172 522 aaKnown RBP eCLIP19.02■□□□□ 0.64
COL5A3-201ENST00000264828 ECE2O60344 883 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 TDP2O95551 362 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 MYBL1P10243 752 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 CDH6P55285 790 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 CLEC4GQ6UXB4 293 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 SPATA4Q8NEY3 305 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 ZNF473Q8WTR7 871 aaKnown RBP19.02■□□□□ 0.64
COL5A3-201ENST00000264828 IL17RAQ96F46 866 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 CEP95Q96GE4 821 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 TRIM51Q9BSJ1 452 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 OVOS2A0A0G2JMS6 1433 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 OVOS2A0A0J9YW53 1432 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 OVOS2Q6IE36 1432 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 CHN1P15882 459 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 LONRF1Q17RB8 773 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 EFHC2Q5JST6 749 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 KIAA2013Q8IYS2 634 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 RNPC3Q96LT9 517 aaKnown RBP19.02■□□□□ 0.64
COL5A3-201ENST00000264828 EHD2Q9NZN4 543 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 SEL1LQ9UBV2 794 aa19.02■□□□□ 0.64
COL5A3-201ENST00000264828 SOX11P35716 441 aa19.02■□□□□ 0.63
COL5A3-201ENST00000264828 MKRN4PQ13434 485 aaPredicted RBP19.02■□□□□ 0.63
COL5A3-201ENST00000264828 FOXP4Q8IVH2 680 aaPredicted RBP19.02■□□□□ 0.63
COL5A3-201ENST00000264828 B4GALNT2Q8NHY0 566 aa19.02■□□□□ 0.63
COL5A3-201ENST00000264828 HPS3Q969F9 1004 aa19.02■□□□□ 0.63
COL5A3-201ENST00000264828 TRABDQ9H4I3 376 aa19.02■□□□□ 0.63
COL5A3-201ENST00000264828 RUBCNLQ9H714 662 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 APOL1O14791 398 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 ANKRD40Q6AI12 368 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 STAG2Q8N3U4 1231 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 PRKAG2Q9UGJ0 569 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 DBR1Q9UK59 544 aaKnown RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 VCAM1P19320 739 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 IL10P22301 178 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 CACNB2Q08289 660 aaPredicted RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 TEKT4Q8WW24 435 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 ZNF212Q9UDV6 495 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 CYP26A1O43174 497 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 ACBD5Q5T8D3 534 aaPredicted RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 SNRNP48Q6IEG0 339 aaKnown RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 NUP93Q8N1F7 819 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 TMA16Q96EY4 203 aaKnown RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 LXNQ9BS40 222 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 TOPORSQ9NS56 1045 aaPredicted RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 ZFXP17010 805 aaPredicted RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 HIF1AQ16665 826 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 ACCSLQ4AC99 568 aa19.01■□□□□ 0.63
COL5A3-201ENST00000264828 MB21D2Q8IYB1 491 aaPredicted RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 IRX2Q9BZI1 471 aaPredicted RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 PRDM5Q9NQX1 630 aaPredicted RBP19.01■□□□□ 0.63
COL5A3-201ENST00000264828 OCM2P0CE71 109 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 OCMP0CE72 109 aaPredicted RBP19■□□□□ 0.63
COL5A3-201ENST00000264828 EIF3EP60228 445 aaKnown RBP19■□□□□ 0.63
COL5A3-201ENST00000264828 DHX34Q14147 1143 aaKnown RBP19■□□□□ 0.63
COL5A3-201ENST00000264828 ZBTB12Q9Y330 459 aaPredicted RBP19■□□□□ 0.63
COL5A3-201ENST00000264828 E2F8A0AVK6 867 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 NFKBIAP25963 317 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 ADGRF4Q8IZF3 695 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 RFFLQ8WZ73 363 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 AGPAT1Q99943 283 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 E9PCH4 1651 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 CPDO75976 1380 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 MDH1P40925 334 aaKnown RBP19■□□□□ 0.63
COL5A3-201ENST00000264828 CNGA3Q16281 694 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 RABGAP1LQ5R372 815 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 PARVAQ9NVD7 372 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 CDV3Q9UKY7 258 aaKnown RBP19■□□□□ 0.63
COL5A3-201ENST00000264828 KCNN4O15554 427 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 GRM4Q14833 912 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 ITPRIPL1Q6GPH6 555 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 BTNL9Q6UXG8 535 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 PGBD4Q96DM1 585 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 CLMNQ96JQ2 1002 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 EPAS1Q99814 870 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 EPN3Q9H201 632 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 EML4Q9HC35 981 aaKnown RBP19■□□□□ 0.63
COL5A3-201ENST00000264828 PIM2Q9P1W9 311 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 CCDC78A2IDD5 438 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 CCDC159P0C7I6 412 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 SESN2P58004 480 aaPredicted RBP19■□□□□ 0.63
COL5A3-201ENST00000264828 COBLL1Q53SF7 1204 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 MARCOQ9UEW3 520 aaPredicted RBP19■□□□□ 0.63
COL5A3-201ENST00000264828 STAP1Q9ULZ2 295 aa19■□□□□ 0.63
COL5A3-201ENST00000264828 RPAP1Q9BWH6 1393 aaPredicted RBP18.99■□□□□ 0.63
COL5A3-201ENST00000264828 PHF20L1A8MW92 1017 aa18.99■□□□□ 0.63
COL5A3-201ENST00000264828 TRPC1P48995 793 aa18.99■□□□□ 0.63
COL5A3-201ENST00000264828 DMC1Q14565 340 aa18.99■□□□□ 0.63
COL5A3-201ENST00000264828 EIF2AK1Q9BQI3 630 aaKnown RBP18.99■□□□□ 0.63
COL5A3-201ENST00000264828 RBAKQ9NYW8 714 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms