RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 HES2Q9Y543 173 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 ANK1P16157 1881 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 OGTO15294 1046 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 TLR3O15455 904 aaKnown RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 MEFVO15553 781 aaPredicted RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 MGEA5O60502 916 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 GNA14O95837 355 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 IBSPP21815 317 aaPredicted RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 CYP2C18P33260 490 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 KLK7P49862 253 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 CCL23P55773 120 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 MARSP56192 900 aaKnown RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 CYP24A1Q07973 514 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 GPNMBQ14956 572 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 MAN2A1Q16706 1144 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 VWA3BQ502W6 1294 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 UBXN11Q5T124 520 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 NECAB2Q7Z6G3 386 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 TMEM130Q8N3G9 435 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 SPC24Q8NBT2 197 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 ANKRD20A12PQ8NF67 263 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 SLC35C1Q96A29 364 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 FAM212AQ96EL1 285 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 SCLYQ96I15 445 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 MFSD14AQ96MC6 490 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 MKNK1Q9BUB5 465 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 CXCL16Q9H2A7 254 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 TMX1Q9H3N1 280 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 NDST4Q9H3R1 872 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 PDE11AQ9HCR9 933 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 ERVK-5Q9HDB9 667 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 RNF19AQ9NV58 838 aa10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNRNP40-201ENST00000263694 ZNF233A6NK53 670 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 RPLP2P05387 115 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 STAG3L1P0CL83 205 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 DLATP10515 647 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 MCF2P10911 925 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 SELPP16109 830 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 VAMP7P51809 220 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 UBXN1Q04323 297 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 NCBP1Q09161 790 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 KCNH2Q12809 1159 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 BFSP1Q12934 665 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 PAK2Q13177 524 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 BFSP2Q13515 415 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 ENOX2Q16206 610 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 FILIP1LQ4L180 1135 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 COL13A1Q5TAT6 717 aaPredicted RBP10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 C1orf53Q5VUE5 145 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 SCARA3Q6AZY7 606 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 NOTUMQ6P988 496 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 SLC27A1Q6PCB7 646 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 LRRC8DQ7L1W4 858 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 CAGE1Q8TC20 777 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 PARD3BQ8TEW8 1205 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 APOL6Q9BWW8 343 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 HIPK3Q9H422 1215 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 METTL14Q9HCE5 456 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 CPSF3Q9UKF6 684 aaKnown RBP10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 PTPRJQ12913 1337 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 MROH7Q68CQ1 1323 aa10.59□□□□□ -0.71
SNRNP40-201ENST00000263694 ALPK3Q96L96 1907 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 CITO14578 2027 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 LRRIQ3A6PVS8 624 aaPredicted RBP10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 LGALS16A8MUM7 142 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 GPR182O15218 404 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 CBFA2T2O43439 604 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 NBNO60934 754 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 LRRN2O75325 713 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 LDHAP00338 332 aaKnown RBP10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 CXCL8P10145 99 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 KRT13P13646 458 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 ITGB8P26012 769 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 GCLMP48507 274 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 APBA1Q02410 837 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 PPP3CAQ08209 521 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 TCTN1Q2MV58 587 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 TWF2Q6IBS0 349 aaKnown RBP10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 INTS8Q75QN2 995 aaKnown RBP10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 DRC7Q8IY82 874 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 ZNF516Q92618 1163 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 ELMO3Q96BJ8 720 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 MRFAP1L1Q96HT8 127 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 TOX2Q96NM4 488 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 ADPGKQ9BRR6 497 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 CRACR2AQ9BSW2 395 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 WNT8AQ9H1J5 351 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 NXF3Q9H4D5 531 aaKnown RBP10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 TMEM39AQ9NV64 488 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 SNTG2Q9NY99 539 aa10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 RBAKQ9NYW8 714 aaPredicted RBP10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 MKI67P46013 3256 aaKnown RBP10.58□□□□□ -0.72
SNRNP40-201ENST00000263694 TRIM43BA6NCK2 446 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 MEIS3P2A8K0S8 358 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 LACTBL1A8MY62 500 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 KIAA0391O15091 583 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms