RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 VTI1AQ96AJ9 217 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 TCHPQ9BT92 498 aa17.09■□□□□ 0.33
VPS26A-201ENST00000263559 PTPRJQ12913 1337 aa17.08■□□□□ 0.33
VPS26A-201ENST00000263559 HOXD8P13378 290 aaPredicted RBP17.08■□□□□ 0.33
VPS26A-201ENST00000263559 CCL14Q16627 93 aa17.08■□□□□ 0.33
VPS26A-201ENST00000263559 GLYCTKQ8IVS8 523 aa17.08■□□□□ 0.33
VPS26A-201ENST00000263559 USP6NLQ92738 828 aa17.08■□□□□ 0.33
VPS26A-201ENST00000263559 FZD8Q9H461 694 aa17.08■□□□□ 0.33
VPS26A-201ENST00000263559 TLL2Q9Y6L7 1015 aa17.08■□□□□ 0.33
VPS26A-201ENST00000263559 ANO9A1A5B4 782 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 EFCAB8A8MWE9 144 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 INO80B-WBP1J3KQ70 363 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 MAGEB2O15479 319 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 C4BPAP04003 597 aaKnown RBP17.08■□□□□ 0.32
VPS26A-201ENST00000263559 HOXC6P09630 235 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 PTENP60484 403 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 PRPF4BQ13523 1007 aaKnown RBP17.08■□□□□ 0.32
VPS26A-201ENST00000263559 DGKDQ16760 1214 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 LINC01465Q8N7H1 131 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 U2AF1L4Q8WU68 220 aaKnown RBP17.08■□□□□ 0.32
VPS26A-201ENST00000263559 TATDN2Q93075 761 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 NT5C1BQ96P26 610 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 NOX5Q96PH1 765 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 PI4K2AQ9BTU6 479 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 INO80BQ9C086 356 aaPredicted RBP17.08■□□□□ 0.32
VPS26A-201ENST00000263559 MINDY3Q9H8M7 445 aa17.08■□□□□ 0.32
VPS26A-201ENST00000263559 COL1A2P08123 1366 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 ACKR2O00590 384 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 DYNC1LI2O43237 492 aaPredicted RBP17.07■□□□□ 0.32
VPS26A-201ENST00000263559 FAM189A1O60320 539 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 CYP2B6P20813 491 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 TNFSF9P41273 254 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 MFAP3P55082 362 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 NAP1L1P55209 391 aaKnown RBP17.07■□□□□ 0.32
VPS26A-201ENST00000263559 ALS2CR12Q96Q35 445 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 ZFYVE28Q9HCC9 887 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 PUF60Q9UHX1 559 aaKnown RBP17.07■□□□□ 0.32
VPS26A-201ENST00000263559 JRKLQ9Y4A0 524 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 SAR1BQ9Y6B6 198 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 CNTNAP2Q9UHC6 1331 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 ABLIM1O14639 778 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 SRGAP2O75044 1071 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 CYP2C19P33261 490 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 USP8P40818 1118 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 MBTD1Q05BQ5 628 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 HSP90AA2PQ14568 343 aaPredicted RBP17.07■□□□□ 0.32
VPS26A-201ENST00000263559 ZACNQ401N2 412 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 TDRD10Q5VZ19 366 aaKnown RBP17.07■□□□□ 0.32
VPS26A-201ENST00000263559 MTHFD1LQ6UB35 978 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 SRGAP1Q7Z6B7 1085 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 UBXN4Q92575 508 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 IFT122Q9HBG6 1241 aa17.07■□□□□ 0.32
VPS26A-201ENST00000263559 B4GALT5O43286 388 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 IQCF3P0C7M6 154 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 ZNF865P0CJ78 1059 aaPredicted RBP17.06■□□□□ 0.32
VPS26A-201ENST00000263559 CEP112Q8N8E3 955 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 ZIC5Q96T25 663 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 PPP1R16BQ96T49 567 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 GNEQ9Y223 722 aaKnown RBP17.06■□□□□ 0.32
VPS26A-201ENST00000263559 ZSWIM8A7E2V4 1837 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 TNFAIP3P21580 790 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 MCL1Q07820 350 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 CRHR2Q13324 411 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 WHAMMP3Q1A5X7 153 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 TSHZ1Q6ZSZ6 1077 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 FAM71AQ8IYT1 594 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 SLC20A1Q8WUM9 679 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 SHC3Q92529 594 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 AGPAT1Q99943 283 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 PTPRHQ9HD43 1115 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 GJD2Q9UKL4 321 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 AKT3Q9Y243 479 aa17.06■□□□□ 0.32
VPS26A-201ENST00000263559 A0A087WZ62 844 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 BTNL10A8MVZ5 291 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 CSDE1O75534 798 aaKnown RBP17.05■□□□□ 0.32
VPS26A-201ENST00000263559 PROZP22891 400 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 PPFIA1Q13136 1202 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 GRIK4Q16099 956 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 MARCH8Q5T0T0 291 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 ATF7IP2Q5U623 682 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 CCDC102AQ96A19 550 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 CGRRF1Q99675 332 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 FDXACB1Q9BRP7 624 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-201ENST00000263559 NFKBIZQ9BYH8 718 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 ABT1Q9ULW3 272 aaKnown RBP17.05■□□□□ 0.32
VPS26A-201ENST00000263559 A6NJR5 290 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 OGTO15294 1046 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 SGPL1O95470 568 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 VNN1O95497 513 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 HLA-DRAP01903 254 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 VTNP04004 478 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 H2AFZP0C0S5 128 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 TMOD1P28289 359 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 POU5F1BQ06416 359 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 BIRC3Q13489 604 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 OLFML2BQ68BL8 750 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 H2AFVQ71UI9 128 aa17.05■□□□□ 0.32
VPS26A-201ENST00000263559 RSRC2Q7L4I2 434 aaKnown RBP17.05■□□□□ 0.32
VPS26A-201ENST00000263559 CDR2LQ86X02 465 aaPredicted RBP17.05■□□□□ 0.32
VPS26A-201ENST00000263559 BRSK2Q8IWQ3 736 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms