RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SPATA20Q8TB22 786 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 CCDC51Q96ER9 411 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 STRA6Q9BX79 667 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 EIF2AQ9BY44 585 aaKnown RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 SEMA6BQ9H3T3 888 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 ST6GALNAC4Q9H4F1 302 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 PDZD7Q9H5P4 517 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 ELAC1Q9H777 363 aaKnown RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 OLFML3Q9NRN5 406 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 FAM105AQ9NUU6 356 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 RNF19AQ9NV58 838 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 YBX2Q9Y2T7 364 aaKnown RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 PCDHA5Q9Y5H7 936 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 TLL1O43897 1013 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 MYBP10242 640 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 PPP1R2P41236 205 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 GATMP50440 423 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 CASP5P51878 434 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 DPYDQ12882 1025 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 PSMD2Q13200 908 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 PNOCQ13519 176 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 KCNB1Q14721 858 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 SLC27A1Q6PCB7 646 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 GLIS3Q8NEA6 775 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 ACO2Q99798 780 aaKnown RBP12.68□□□□□ -0.38
PFDN1-201ENST00000261813 TARS2Q9BW92 718 aaKnown RBP12.68□□□□□ -0.38
PFDN1-201ENST00000261813 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
PFDN1-201ENST00000261813 MRPL44Q9H9J2 332 aaKnown RBP12.68□□□□□ -0.38
PFDN1-201ENST00000261813 TMEM161AQ9NX61 479 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 LRFN2Q9ULH4 789 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 TBX20Q9UMR3 447 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 PCDHB2Q9Y5E7 798 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 PCDHA11Q9Y5I1 949 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 TTC3P53804 2025 aa12.68□□□□□ -0.38
PFDN1-201ENST00000261813 GBF1Q92538 1859 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 LCHNA4D1U4 455 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 MEIS3P2A8K0S8 358 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 ABLIM1O14639 778 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 N4BP3O15049 544 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 ZNF623O75123 536 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 DGKIO75912 1065 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 ARHGEF15O94989 841 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 NPTXRO95502 500 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 RPN1P04843 607 aaKnown RBP12.67□□□□□ -0.38
PFDN1-201ENST00000261813 STAG3L1P0CL83 205 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 FGFR1P11362 822 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 PROZP22891 400 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 RAB27AP51159 221 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 NLRP12P59046 1061 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 TYRO3Q06418 890 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 STRN3Q13033 797 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 TMEM132AQ24JP5 1023 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 MRPL10Q7Z7H8 261 aaKnown RBP12.67□□□□□ -0.38
PFDN1-201ENST00000261813 MAP4K3Q8IVH8 894 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 MLKLQ8NB16 471 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 RNF169Q8NCN4 708 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 SMG8Q8ND04 991 aaKnown RBP12.67□□□□□ -0.38
PFDN1-201ENST00000261813 LPPQ93052 612 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 ZNF689Q96CS4 500 aaPredicted RBP12.67□□□□□ -0.38
PFDN1-201ENST00000261813 RAD9AQ99638 391 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 PTPRHQ9HD43 1115 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 TNFSF13BQ9Y275 285 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 IPPQ9Y573 584 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 PCDHB7Q9Y5E2 793 aa12.67□□□□□ -0.38
PFDN1-201ENST00000261813 LAMA2P24043 3122 aaKnown RBP12.66□□□□□ -0.38
PFDN1-201ENST00000261813 GCNT3O95395 438 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 EOMESO95936 686 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 PIGRP01833 764 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 SKIP12755 728 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 FOSL2P15408 326 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 SCP2P22307 547 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 KCNA1Q09470 495 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 RAB30Q15771 203 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 KMT5BQ4FZB7 885 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 CLLU1OSQ5K130 101 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 FAM26FQ5R3K3 315 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 SLC39A4Q6P5W5 647 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 ZPBP2Q6X784 338 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 AGMOQ6ZNB7 445 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 HVCN1Q96D96 273 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 ZBTB45Q96K62 511 aaPredicted RBP12.66□□□□□ -0.38
PFDN1-201ENST00000261813 YME1L1Q96TA2 773 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 CDT1Q9H211 546 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 IKZF4Q9H2S9 585 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 NKX2-4Q9H2Z4 354 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 NXF3Q9H4D5 531 aaKnown RBP12.66□□□□□ -0.38
PFDN1-201ENST00000261813 HES2Q9Y543 173 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 INSL6Q9Y581 213 aa12.66□□□□□ -0.38
PFDN1-201ENST00000261813 TMEM265A0A087WTH1 108 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 TISP43B9A030 160 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 PRPF6O94906 941 aaKnown RBP12.65□□□□□ -0.38
PFDN1-201ENST00000261813 KIF20AO95235 890 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 CA3P07451 260 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 ABCD1P33897 745 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 STIM1Q13586 685 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms