RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 GRAPQ13588 217 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 KYNUQ16719 465 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 GADL1Q6ZQY3 521 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 H2AFVQ71UI9 128 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 SLC7A5P1Q8MH63 180 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 ZNF713Q8N859 430 aaPredicted RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 GRAPLQ8TC17 118 aaPredicted RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 RASGRP4Q8TDF6 673 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 ZSWIM5Q9P217 1185 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 EXOC7Q9UPT5 735 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 POLR2MP0CAP2 368 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 PCP11498 1178 aaKnown RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 GABPB2Q8TAK5 448 aaPredicted RBP13.76□□□□□ -0.21
TMEM260-201ENST00000261556 PPP2R3CQ969Q6 453 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 DYNLL2Q96FJ2 89 aa13.76□□□□□ -0.21
TMEM260-201ENST00000261556 MED23Q9ULK4 1368 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 A0A0J9YVX5 310 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 GRID2IPA4D2P6 1211 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 PSMG1O95456 288 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 CD19P15391 556 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 KLRC1P26715 233 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 ARHGEF16Q5VV41 709 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 SYCE1Q8N0S2 351 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 ZNF507Q8TCN5 953 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 LRGUKQ96M69 825 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 KLHL4Q9C0H6 718 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 ZNF229Q9UJW7 825 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 CROTQ9UKG9 612 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 SRPRBQ9Y5M8 271 aaKnown RBP13.75□□□□□ -0.21
TMEM260-201ENST00000261556 KIF1BO60333 1816 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 SALL3Q9BXA9 1300 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 PEX11AO75192 247 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 OR6B1O95007 311 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 OR52Z1P0C646 297 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 GSTT2P0CG29 244 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 GSTT2BP0CG30 244 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 SLC16A2P36021 539 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 ARFIP2P53365 341 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 TAB3Q8N5C8 712 aaPredicted RBP13.75□□□□□ -0.21
TMEM260-201ENST00000261556 GRAMD1AQ96CP6 724 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 AMNQ9BXJ7 453 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 CCDC68Q9H2F9 335 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 PIH1D3Q9NQM4 214 aaKnown RBP13.75□□□□□ -0.21
TMEM260-201ENST00000261556 LRRC42Q9Y546 428 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 GPC6Q9Y625 555 aaPredicted RBP13.75□□□□□ -0.21
TMEM260-201ENST00000261556 O00370 1275 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 STRNO43815 780 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 CIITAP33076 1130 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 POLA2Q14181 598 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 CCDC153Q494R4 210 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 DNAAF5Q86Y56 855 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.75□□□□□ -0.21
TMEM260-201ENST00000261556 DEPTORQ8TB45 409 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 TRIM55Q9BYV6 548 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 BCAP29Q9UHQ4 241 aa13.75□□□□□ -0.21
TMEM260-201ENST00000261556 CALUO43852 315 aaPredicted RBP13.74□□□□□ -0.21
TMEM260-201ENST00000261556 ITGA4P13612 1032 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 PTPN4P29074 926 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 GPATCH4Q5T3I0 446 aaKnown RBP13.74□□□□□ -0.21
TMEM260-201ENST00000261556 KCTD1Q719H9 257 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 GPBP1Q86WP2 473 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 C4orf33Q8N1A6 199 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 DACT3Q96B18 629 aaPredicted RBP13.74□□□□□ -0.21
TMEM260-201ENST00000261556 PRPF18Q99633 342 aaKnown RBP13.74□□□□□ -0.21
TMEM260-201ENST00000261556 SEMA4AQ9H3S1 761 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 GID8Q9NWU2 228 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 CIDEBQ9UHD4 219 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 I3L4J1 428 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 DDAH1O94760 285 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 TMC3Q7Z5M5 1100 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 IFNLR1Q8IU57 520 aaPredicted RBP13.74□□□□□ -0.21
TMEM260-201ENST00000261556 TTLL6Q8N841 843 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 ENAHQ8N8S7 591 aaPredicted RBP13.74□□□□□ -0.21
TMEM260-201ENST00000261556 CALML6Q8TD86 181 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.74□□□□□ -0.21
TMEM260-201ENST00000261556 CFAP57Q96MR6 1250 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 IFT122Q9HBG6 1241 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 PHTF1Q9UMS5 762 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 MAN1A2O60476 641 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 USP1O94782 785 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 KITP10721 976 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 BCRP11274 1271 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 PRDX5P30044 214 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 ATXN3P54252 364 aaPredicted RBP13.74□□□□□ -0.21
TMEM260-201ENST00000261556 SFR1Q86XK3 245 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 CELF1Q92879 486 aaKnown RBP13.74□□□□□ -0.21
TMEM260-201ENST00000261556 ZNF333Q96JL9 665 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 CEP72Q9P209 647 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 SUN2Q9UH99 717 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 HPSEQ9Y251 543 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 HEY1Q9Y5J3 304 aa13.74□□□□□ -0.21
TMEM260-201ENST00000261556 PENKP01210 267 aaPredicted RBP13.73□□□□□ -0.21
TMEM260-201ENST00000261556 DDX5P17844 614 aaKnown RBP13.73□□□□□ -0.21
TMEM260-201ENST00000261556 MCAMP43121 646 aa13.73□□□□□ -0.21
TMEM260-201ENST00000261556 CDK7P50613 346 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms