RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 KCND2Q9NZV8 630 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 SUGT1Q9Y2Z0 365 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 ITIH6Q6UXX5 1313 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 CACNA1SQ13698 1873 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 AP3B1O00203 1094 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 KRT8P05787 483 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 CDH2P19022 906 aaPredicted RBP12.31□□□□□ -0.44
SORL1-201ENST00000260197 TSPAN17Q96FV3 270 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 EDEM3Q9BZQ6 932 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 SLC13A1Q9BZW2 595 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 MYO7AQ13402 2215 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 TTC26A0AVF1 554 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 GOLGA8IPA6NC78 632 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 GOLGA8JA6NMD2 632 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 DDIASQ8IXT1 998 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 ULK4Q96C45 1275 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 PDS5AQ29RF7 1337 aaKnown RBP12.31□□□□□ -0.44
SORL1-201ENST00000260197 A0A1B0GTH6 734 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 H0Y626 953 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 TRIM16O95361 564 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
SORL1-201ENST00000260197 FAM102AQ5T9C2 384 aaPredicted RBP12.31□□□□□ -0.44
SORL1-201ENST00000260197 STX19Q8N4C7 294 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 SPATA4Q8NEY3 305 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 BEST2Q8NFU1 509 aa12.31□□□□□ -0.44
SORL1-201ENST00000260197 ALKBH8Q96BT7 664 aaKnown RBP12.31□□□□□ -0.44
SORL1-201ENST00000260197 DDX47Q9H0S4 455 aaKnown RBP12.31□□□□□ -0.44
SORL1-201ENST00000260197 SUFUQ9UMX1 484 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 ALDH18A1P54886 795 aaKnown RBP12.3□□□□□ -0.44
SORL1-201ENST00000260197 STAT4Q14765 748 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 CATSPER3Q86XQ3 398 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 ARMC2Q8NEN0 867 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 COA1Q9GZY4 146 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 TBC1D23Q9NUY8 699 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 S100A5P33763 92 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 PTPN12Q05209 780 aaKnown RBP12.3□□□□□ -0.44
SORL1-201ENST00000260197 C16orf89Q6UX73 402 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 CATSPER4Q7RTX7 472 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 AFG1LQ8WV93 481 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 CMTM5Q96DZ9 223 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 NPHS2Q9NP85 383 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 SNX12Q9UMY4 172 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
SORL1-201ENST00000260197 NCK2O43639 380 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 PHF2O75151 1096 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 MAP4P27816 1152 aaKnown RBP12.3□□□□□ -0.44
SORL1-201ENST00000260197 VPS11Q9H270 941 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 ZBTB1Q9Y2K1 713 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 USP15Q9Y4E8 981 aaPredicted RBP12.3□□□□□ -0.44
SORL1-201ENST00000260197 BCAR1P56945 870 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 AGGF1Q8N302 714 aaeCLIP12.3□□□□□ -0.44
SORL1-201ENST00000260197 URGCPQ8TCY9 931 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 PITPNM2Q9BZ72 1349 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 DENND3A2RUS2 1198 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 LTKP29376 864 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 TRADDQ15628 312 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 RAPGEF5Q92565 580 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 KIF2CQ99661 725 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 TSSK1BQ9BXA7 367 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 ATG2BQ96BY7 2078 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 HSPA1AP0DMV8 641 aaKnown RBP12.3□□□□□ -0.44
SORL1-201ENST00000260197 HSPA1BP0DMV9 641 aaKnown RBP12.3□□□□□ -0.44
SORL1-201ENST00000260197 HADHAP40939 763 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 ABCE1P61221 599 aaKnown RBP12.3□□□□□ -0.44
SORL1-201ENST00000260197 NCAPHQ15003 741 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 IZUMO3Q5VZ72 239 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 RASGRP2Q7LDG7 609 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 CYGBQ8WWM9 190 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 SCN2AQ99250 2005 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 ESPL1Q14674 2120 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 ANP32DO95626 131 aa12.3□□□□□ -0.44
SORL1-201ENST00000260197 USP11P51784 963 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 TWF2Q6IBS0 349 aaKnown RBP12.29□□□□□ -0.44
SORL1-201ENST00000260197 FAM49AQ9H0Q0 323 aaPredicted RBP12.29□□□□□ -0.44
SORL1-201ENST00000260197 ZNF302Q9NR11 478 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 BFARQ9NZS9 450 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 MROH7-TTC4A0A0A0MT08 1334 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 EMSYQ7Z589 1322 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 BRAFP15056 766 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 ACAP3Q96P50 834 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 CCT8L2Q96SF2 557 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 C2orf40Q9H1Z8 148 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 ZHX2Q9Y6X8 837 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 CEP290O15078 2479 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 CDH16O75309 829 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 KRT14P02533 472 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 TRPC1P48995 793 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 CDH6P55285 790 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 GRAPQ13588 217 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 LAMB3Q13751 1172 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 TRIM60Q495X7 471 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 MB21D2Q8IYB1 491 aaPredicted RBP12.29□□□□□ -0.44
SORL1-201ENST00000260197 PPHLN1Q8NEY8 458 aaKnown RBP12.29□□□□□ -0.44
SORL1-201ENST00000260197 OR6B3Q8NGW1 331 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 GRAPLQ8TC17 118 aaPredicted RBP12.29□□□□□ -0.44
SORL1-201ENST00000260197 SEPT8Q92599 483 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 DBNDD1Q9H9R9 158 aa12.29□□□□□ -0.44
SORL1-201ENST00000260197 PIH1D3Q9NQM4 214 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms