RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PSMC2P35998 433 aaKnown RBP17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 FPGSQ05932 587 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 SLC24A5Q71RS6 500 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 C16orf59Q7L2K0 433 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 RPUSD2Q8IZ73 545 aaKnown RBP17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 KIAA1586Q9HCI6 787 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 SNTG2Q9NY99 539 aa17.21■□□□□ 0.35
CCDC90B-201ENST00000260054 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 ZNF623O75123 536 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 PFKMP08237 780 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 CLTAP09496 248 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 ATF7P17544 494 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 RAB27AP51159 221 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 EPHB4P54760 987 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 WNT7BP56706 349 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 PPIGQ13427 754 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 FAM43BQ6ZT52 329 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 FAM186BQ8IYM0 893 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 BORCS6Q96GS4 357 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 CNOT6LQ96LI5 555 aaKnown RBP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 APOL6Q9BWW8 343 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 ZNF233A6NK53 670 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 MEIS3P2A8K0S8 358 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 GOLGA6L19H0YKK7 550 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 CXCL8P10145 99 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 EPB41P11171 864 aaKnown RBP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 ATP1A3P13637 1013 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 IBSPP21815 317 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 AKAP5P24588 427 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 FAM189BP81408 668 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 IKBKEQ14164 716 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 ENOX2Q16206 610 aaKnown RBP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 ECHDC2Q86YB7 292 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 ACAP3Q96P50 834 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 CCDC94Q9BW85 323 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 C1orf112Q9NSG2 853 aa17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 RBAKQ9NYW8 714 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-201ENST00000260054 KCNJ18B7U540 433 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 MAPK13O15264 365 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 RECQL4O94761 1208 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 MARSP56192 900 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 CYP24A1Q07973 514 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 KCNJ12Q14500 433 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 KYAT1Q16773 422 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 CCDC40Q4G0X9 1142 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 ZNF598Q86UK7 904 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 CREBRFQ8IUR6 639 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 BRSK2Q8IWQ3 736 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 PLEKHO2Q8TD55 490 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 LPPQ93052 612 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 MFSD14AQ96MC6 490 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 NR2E3Q9Y5X4 410 aa17.19■□□□□ 0.34
CCDC90B-201ENST00000260054 MICAL3Q7RTP6 2002 aa17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 GNA14O95837 355 aa17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 SKIP12755 728 aa17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 SLC10A6Q3KNW5 377 aa17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.18■□□□□ 0.341e-8■■■■■ 31.8
CCDC90B-201ENST00000260054 FRMD5Q7Z6J6 570 aa17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 FAM114A1Q8IWE2 563 aa17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 RNF169Q8NCN4 708 aa17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 CXCL16Q9H2A7 254 aa17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 RPF1Q9H9Y2 349 aaKnown RBP17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 PARP2Q9UGN5 583 aa17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 ARMCX3Q9UH62 379 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-201ENST00000260054 ABHD14A-ACY1A0A1B0GW23 586 aa17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 ITGA4P13612 1032 aa17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 DLG4P78352 724 aa17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 TCP11X2Q5H9J9 407 aa17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 AGMOQ6ZNB7 445 aa17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 ZNF365Q70YC5 407 aa17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 INTS8Q75QN2 995 aaKnown RBP17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 OTOP2Q7RTS6 562 aa17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 LBHD1Q9BQE6 289 aaPredicted RBP17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 METTL14Q9HCE5 456 aaKnown RBP17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 PDE11AQ9HCR9 933 aa17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 MAGEC2Q9UBF1 373 aaPredicted RBP17.17■□□□□ 0.34
CCDC90B-201ENST00000260054 TTC26A0AVF1 554 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 TULP1O00294 542 aaPredicted RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 FGBP02675 491 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 EEF1GP26641 437 aaKnown RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 VAMP7P51809 220 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 TPM4P67936 248 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 POU5F1Q01860 360 aaKnown RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 BFSP1Q12934 665 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 HSP90AA2PQ14568 343 aaPredicted RBP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 PSMD6Q15008 389 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 TRIM59Q8IWR1 403 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 HACE1Q8IYU2 909 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 PARD3BQ8TEW8 1205 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 CCDC127Q96BQ5 260 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 FAM212AQ96EL1 285 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 SNX27Q96L92 541 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 TMEM161AQ9NX61 479 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 KLK14Q9P0G3 267 aa17.16■□□□□ 0.34
CCDC90B-201ENST00000260054 TTC3P53804 2025 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms