RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 PTPRHQ9HD43 1115 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 SNTG2Q9NY99 539 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 FAM13BQ9NYF5 915 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 KLK14Q9P0G3 267 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 KANSL3Q9P2N6 904 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 DNAJB4Q9UDY4 337 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 GIT1Q9Y2X7 761 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 REV3LO60673 3130 aa9.36□□□□□ -0.91
TMEM258-201ENST00000257262 H0YCG3 227 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 K7ENM7 598 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 INPPL1O15357 1258 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 POLR2DO15514 142 aaKnown RBP9.35□□□□□ -0.91
TMEM258-201ENST00000257262 B4GALT3O60512 393 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 ZC3H11AO75152 810 aaKnown RBP eCLIP9.35□□□□□ -0.91
TMEM258-201ENST00000257262 CSPG5O95196 566 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 ALDH2P05091 517 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 GALTP07902 379 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 IDEP14735 1019 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 ALDH7A1P49419 539 aaKnown RBP9.35□□□□□ -0.91
TMEM258-201ENST00000257262 SCNN1GP51170 649 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 CAMK2BQ13554 666 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 CSPP1Q1MSJ5 1256 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 ZC2HC1CQ53FD0 456 aaPredicted RBP9.35□□□□□ -0.91
TMEM258-201ENST00000257262 ADALQ6DHV7 355 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 FAM178BQ8IXR5 827 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 HACE1Q8IYU2 909 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 ZNF454Q8N9F8 522 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 IQUBQ8NA54 791 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 GSTCDQ8NEC7 633 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 FAM193BQ96PV7 902 aaPredicted RBP9.35□□□□□ -0.91
TMEM258-201ENST00000257262 TCHPQ9BT92 498 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 LRRC27Q9C0I9 530 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 SCAND2PQ9GZW5 306 aaPredicted RBP9.35□□□□□ -0.91
TMEM258-201ENST00000257262 CXCL16Q9H2A7 254 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 TNMDQ9H2S6 317 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 PRDM6Q9NQX0 595 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 KBTBD4Q9NVX7 518 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 SPG21Q9NZD8 308 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 TBX20Q9UMR3 447 aa9.35□□□□□ -0.91
TMEM258-201ENST00000257262 A0A1B0GVL5 298 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 NRP1O14786 923 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 MCF2P10911 925 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 PROZP22891 400 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 CMA1P23946 247 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 IRS1P35568 1242 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 SLC11A1P49279 550 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 ERVFC1P60507 584 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 OSTNP61366 133 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 GTF2BQ00403 316 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 PLCB3Q01970 1234 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 KRT17Q04695 432 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 UBE3AQ05086 875 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 SKIV2LQ15477 1246 aaKnown RBP9.34□□□□□ -0.91
TMEM258-201ENST00000257262 DCAF4L1Q3SXM0 396 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 ZNF568Q3ZCX4 644 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 MPZL3Q6UWV2 235 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 ZPBP2Q6X784 338 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 ZNF720Q7Z2F6 126 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 SFR1Q86XK3 245 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 COLGALT2Q8IYK4 626 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 SLC39A11Q8N1S5 342 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 CEP120Q8N960 986 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 MRPS27Q92552 414 aaKnown RBP9.34□□□□□ -0.91
TMEM258-201ENST00000257262 KCNN1Q92952 543 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 CDT1Q9H211 546 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 CUEDC2Q9H467 287 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 NSUN3Q9H649 340 aaKnown RBP9.34□□□□□ -0.91
TMEM258-201ENST00000257262 GDPD2Q9HCC8 539 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 PANK4Q9NVE7 773 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 TBC1D7Q9P0N9 293 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 SERTAD1Q9UHV2 236 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 KCNH3Q9ULD8 1083 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 GDAQ9Y2T3 454 aa9.34□□□□□ -0.91
TMEM258-201ENST00000257262 ABLIM1O14639 778 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 CLDN3O15551 220 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 TOM1L1O75674 476 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 RECQL4O94761 1208 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 HARSP12081 509 aaKnown RBP9.33□□□□□ -0.92
TMEM258-201ENST00000257262 PFKFB1P16118 471 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 GAP43P17677 238 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 SCP2P22307 547 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 CASP1P29466 404 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 PPM1AP35813 382 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 GRM5P41594 1212 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 AFMP43652 599 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 OR1G1P47890 313 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 AMPD3Q01432 767 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 SEZ6Q53EL9 994 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 HERC4Q5GLZ8 1057 aaPredicted RBP9.33□□□□□ -0.92
TMEM258-201ENST00000257262 TCEAL5Q5H9L2 206 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 APBB1IPQ7Z5R6 666 aaPredicted RBP9.33□□□□□ -0.92
TMEM258-201ENST00000257262 TMEM173Q86WV6 379 aaPredicted RBP9.33□□□□□ -0.92
TMEM258-201ENST00000257262 MICAL1Q8TDZ2 1067 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 BCL7CQ8WUZ0 217 aaPredicted RBP9.33□□□□□ -0.92
TMEM258-201ENST00000257262 RNF166Q96A37 237 aaPredicted RBP9.33□□□□□ -0.92
TMEM258-201ENST00000257262 BICD1Q96G01 975 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 IGSF21Q96ID5 467 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 C7orf25Q9BPX7 421 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 TMEM175Q9BSA9 504 aa9.33□□□□□ -0.92
TMEM258-201ENST00000257262 STRA6Q9BX79 667 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms