RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 PDZD7Q9H5P4 517 aa23.25■■□□□ 1.31
NEDD8-201ENST00000250495 FNIP2Q9P278 1114 aa23.25■■□□□ 1.31
NEDD8-201ENST00000250495 THP07101 528 aa23.24■■□□□ 1.31
NEDD8-201ENST00000250495 HSP90AA2PQ14568 343 aaPredicted RBP23.24■■□□□ 1.31
NEDD8-201ENST00000250495 PALB2Q86YC2 1186 aa23.24■■□□□ 1.31
NEDD8-201ENST00000250495 KIFAP3Q92845 792 aa23.24■■□□□ 1.31
NEDD8-201ENST00000250495 SNTG2Q9NY99 539 aa23.24■■□□□ 1.31
NEDD8-201ENST00000250495 KIAA1024Q9UPX6 916 aa23.24■■□□□ 1.31
NEDD8-201ENST00000250495 PDGFBP01127 241 aaPredicted RBP23.23■■□□□ 1.31
NEDD8-201ENST00000250495 LIG1P18858 919 aa23.23■■□□□ 1.31
NEDD8-201ENST00000250495 U2AF2P26368 475 aaKnown RBP eCLIP23.23■■□□□ 1.311e-6■□□□□ 10.9
NEDD8-201ENST00000250495 EFNA5P52803 228 aa23.23■■□□□ 1.31
NEDD8-201ENST00000250495 TCF15Q12870 199 aa23.23■■□□□ 1.31
NEDD8-201ENST00000250495 RIN2Q8WYP3 895 aaPredicted RBP23.23■■□□□ 1.31
NEDD8-201ENST00000250495 STAMQ92783 540 aa23.23■■□□□ 1.31
NEDD8-201ENST00000250495 KIF2CQ99661 725 aa23.23■■□□□ 1.31
NEDD8-201ENST00000250495 CCDC113Q9H0I3 377 aa23.23■■□□□ 1.31
NEDD8-201ENST00000250495 BHMT2Q9H2M3 363 aa23.23■■□□□ 1.31
NEDD8-201ENST00000250495 DENND4AQ7Z401 1863 aa23.23■■□□□ 1.31
NEDD8-201ENST00000250495 KMT2EQ8IZD2 1858 aa23.23■■□□□ 1.31
NEDD8-201ENST00000250495 MTCL1Q9Y4B5 1905 aaKnown RBP23.22■■□□□ 1.31
NEDD8-201ENST00000250495 C2orf16Q68DN1 1984 aa23.22■■□□□ 1.31
NEDD8-201ENST00000250495 TTLL13PA6NNM8 815 aa23.22■■□□□ 1.31
NEDD8-201ENST00000250495 PTGDRQ13258 359 aa23.22■■□□□ 1.31
NEDD8-201ENST00000250495 ECM1Q16610 540 aa23.22■■□□□ 1.31
NEDD8-201ENST00000250495 RABGGTAQ92696 567 aa23.22■■□□□ 1.31
NEDD8-201ENST00000250495 B3GALT6Q96L58 329 aa23.22■■□□□ 1.31
NEDD8-201ENST00000250495 WDR6Q9NNW5 1121 aaKnown RBP23.22■■□□□ 1.31
NEDD8-201ENST00000250495 IGSF9Q9P2J2 1179 aa23.22■■□□□ 1.31
NEDD8-201ENST00000250495 SF3B1O75533 1304 aaKnown RBP eCLIP23.22■■□□□ 1.314e-7■■■■■ 86.2
NEDD8-201ENST00000250495 TGM5O43548 720 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 RECQL4O94761 1208 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 SPATA31D3P0C874 917 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 TDGQ13569 410 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 NBR1Q14596 966 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 DCAF4L1Q3SXM0 396 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 SPATA31D4Q6ZUB0 917 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 APBB1IPQ7Z5R6 666 aaPredicted RBP23.21■■□□□ 1.31
NEDD8-201ENST00000250495 IGSF22Q8N9C0 903 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 SMG7Q92540 1137 aaKnown RBP23.21■■□□□ 1.31
NEDD8-201ENST00000250495 SMOC2Q9H3U7 446 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 PIDD1Q9HB75 910 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 DDX19AQ9NUU7 478 aaKnown RBP23.21■■□□□ 1.31
NEDD8-201ENST00000250495 KIF3AQ9Y496 699 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 PLXNA3P51805 1871 aa23.21■■□□□ 1.31
NEDD8-201ENST00000250495 WDFY4Q6ZS81 3184 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 CASTOR2A6NHX0 329 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 K7ERI5 159 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 LAD1O00515 517 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 PTGESO14684 152 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 RFPL2O75678 378 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 MYBP10242 640 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 TOB1P50616 345 aaPredicted RBP23.2■■□□□ 1.3
NEDD8-201ENST00000250495 LILRA6Q6PI73 481 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 SNX29Q8TEQ0 813 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 PAAF1Q9BRP4 392 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 TTPALQ9BTX7 342 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 NT5C3AQ9H0P0 336 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 MFSD1Q9H3U5 465 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 KCNK12Q9HB15 430 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 POLD4Q9HCU8 107 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 ZDHHC7Q9NXF8 308 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 DNM3Q9UQ16 869 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 USP20Q9Y2K6 914 aa23.2■■□□□ 1.3
NEDD8-201ENST00000250495 PAPLNO95428 1278 aa23.19■■□□□ 1.3
NEDD8-201ENST00000250495 GBP2P32456 591 aaPredicted RBP23.19■■□□□ 1.3
NEDD8-201ENST00000250495 ELAVL2Q12926 359 aaKnown RBP23.19■■□□□ 1.3
NEDD8-201ENST00000250495 FAM171A1Q5VUB5 890 aa23.19■■□□□ 1.3
NEDD8-201ENST00000250495 KRT79Q5XKE5 535 aa23.19■■□□□ 1.3
NEDD8-201ENST00000250495 EEF1DP3Q658K8 133 aa23.19■■□□□ 1.3
NEDD8-201ENST00000250495 GLYCTKQ8IVS8 523 aa23.19■■□□□ 1.3
NEDD8-201ENST00000250495 CACNG4Q9UBN1 327 aa23.19■■□□□ 1.3
NEDD8-201ENST00000250495 GDAQ9Y2T3 454 aa23.19■■□□□ 1.3
NEDD8-201ENST00000250495 PCDHB6Q9Y5E3 794 aa23.19■■□□□ 1.3
NEDD8-201ENST00000250495 CLUHO75153 1309 aa23.18■■□□□ 1.3
NEDD8-201ENST00000250495 RPL17P18621 184 aaKnown RBP23.18■■□□□ 1.3
NEDD8-201ENST00000250495 RTP2Q5QGT7 225 aa23.18■■□□□ 1.3
NEDD8-201ENST00000250495 ATF7IP2Q5U623 682 aa23.18■■□□□ 1.3
NEDD8-201ENST00000250495 PDXDC1Q6P996 788 aa23.18■■□□□ 1.3
NEDD8-201ENST00000250495 DTHD1Q6ZMT9 781 aa23.18■■□□□ 1.3
NEDD8-201ENST00000250495 ZNF707Q96C28 371 aaPredicted RBP23.18■■□□□ 1.3
NEDD8-201ENST00000250495 KIFC3Q9BVG8 833 aa23.18■■□□□ 1.3
NEDD8-201ENST00000250495 PRKD2Q9BZL6 878 aa23.18■■□□□ 1.3
NEDD8-201ENST00000250495 KIF4AO95239 1232 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 EDN1P05305 212 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 PRPHP41219 470 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 CLCN5P51795 746 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 NAB2Q15742 525 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 C8orf34Q49A92 452 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 NT5DC1Q5TFE4 455 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 ASTLQ6HA08 431 aaPredicted RBP23.17■■□□□ 1.3
NEDD8-201ENST00000250495 PRSS55Q6UWB4 352 aaPredicted RBP23.17■■□□□ 1.3
NEDD8-201ENST00000250495 CEP57Q86XR8 500 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 HASPINQ8TF76 798 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 PIK3R5Q8WYR1 880 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 PHOX2BQ99453 314 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 EPS15L1Q9UBC2 864 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 DUSP12Q9UNI6 340 aa23.17■■□□□ 1.3
NEDD8-201ENST00000250495 PHLPP2Q6ZVD8 1323 aa23.16■■□□□ 1.3
NEDD8-201ENST00000250495 CCDC169A6NNP5 214 aa23.16■■□□□ 1.3
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