RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 C11orf63Q6NUN7 778 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 ERO1BQ86YB8 467 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 PSD3Q9NYI0 1048 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 RNF181Q9P0P0 153 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 LRRIQ4A6NIV6 560 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 ZC3H11AO75152 810 aaKnown RBP eCLIP27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 DCAF12L1Q5VU92 463 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 IFT81Q8WYA0 676 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 DHX38Q92620 1227 aaKnown RBP27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 ELMO3Q96BJ8 720 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 AGO2Q9UKV8 859 aaKnown RBP27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 CXCL11O14625 94 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 PDE6CP51160 858 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 NLRP11P59045 1033 aaKnown RBP27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 CDR2Q01850 454 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 GCNT1Q02742 428 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 ENOSF1Q7L5Y1 443 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 TSEN2Q8NCE0 465 aaKnown RBP27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 AFAP1L1Q8TED9 768 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 RIN2Q8WYP3 895 aaPredicted RBP27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 FAM84AQ96KN4 292 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 HAPLN2Q9GZV7 340 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 CARD9Q9H257 536 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 R3HDMLQ9H3Y0 253 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 NRBP2Q9NSY0 501 aa27.11■■□□□ 1.93
TMEM55B-201ENST00000250489 K7ERI5 159 aa27.1■■□□□ 1.93
TMEM55B-201ENST00000250489 TGFB3P10600 412 aa27.1■■□□□ 1.93
TMEM55B-201ENST00000250489 ITGA4P13612 1032 aa27.1■■□□□ 1.93
TMEM55B-201ENST00000250489 FAM160B1Q5W0V3 765 aa27.1■■□□□ 1.93
TMEM55B-201ENST00000250489 PI4K2AQ9BTU6 479 aa27.1■■□□□ 1.93
TMEM55B-201ENST00000250489 ALG6Q9Y672 507 aa27.1■■□□□ 1.93
TMEM55B-201ENST00000250489 SPDYE5A6NIY4 337 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 SART1O43290 800 aaKnown RBP27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 MTA2O94776 668 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 GGPS1O95749 300 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 STAT5BP51692 787 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 ANKRD13AQ8IZ07 590 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 DDX1Q92499 740 aaKnown RBP27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 DDX47Q9H0S4 455 aaKnown RBP27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 BHMG1C9JSJ3 638 aaPredicted RBP27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 WNT7BP56706 349 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 SLFN12LQ6IEE8 588 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 METTL7BQ6UX53 244 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 CRELD2Q6UXH1 353 aaPredicted RBP27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 SEPT1Q8WYJ6 367 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 FNBP1Q96RU3 617 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 AGTPBP1Q9UPW5 1226 aa27.09■■□□□ 1.93
TMEM55B-201ENST00000250489 SLC25A27O95847 323 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 FAM153BP0C7A2 387 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 TCF7P36402 384 aaPredicted RBP27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 ACOT2P49753 483 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 ERVK-9P63128 1117 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 TRADDQ15628 312 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 ZACNQ401N2 412 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 FAM153CQ494X1 144 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 LMBRD2Q68DH5 695 aaPredicted RBP27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 MOB2Q70IA6 237 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 EEPD1Q7L9B9 569 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 ZBTB45Q96K62 511 aaPredicted RBP27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 FAM81BQ96LP2 452 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 SLITRK6Q9H5Y7 841 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 C1orf112Q9NSG2 853 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 FAM153AQ9UHL3 310 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 KCNH4Q9UQ05 1017 aa27.08■■□□□ 1.93
TMEM55B-201ENST00000250489 FGGP02679 453 aa27.08■■□□□ 1.92
TMEM55B-201ENST00000250489 C4BPAP04003 597 aaKnown RBP27.08■■□□□ 1.92
TMEM55B-201ENST00000250489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.08■■□□□ 1.92
TMEM55B-201ENST00000250489 EIF1ADQ8N9N8 165 aaKnown RBP27.08■■□□□ 1.92
TMEM55B-201ENST00000250489 CDCA5Q96FF9 252 aa27.08■■□□□ 1.92
TMEM55B-201ENST00000250489 RNPC3Q96LT9 517 aaKnown RBP27.08■■□□□ 1.92
TMEM55B-201ENST00000250489 TARS2Q9BW92 718 aaKnown RBP27.08■■□□□ 1.92
TMEM55B-201ENST00000250489 TMEM134Q9H6X4 195 aa27.08■■□□□ 1.92
TMEM55B-201ENST00000250489 CLSTN1O94985 981 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 CYP1A2P05177 515 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 EDN1P05305 212 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 CAPSQ13938 189 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 LY6KQ17RY6 165 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 ALS2CLQ60I27 953 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 ALG3Q92685 438 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 FGD4Q96M96 766 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 FHDC1Q9C0D6 1143 aaPredicted RBP27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 TAF1DQ9H5J8 278 aaPredicted RBP27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 FAM204AQ9H8W3 233 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 TXNRD2Q9NNW7 524 aa27.07■■□□□ 1.92
TMEM55B-201ENST00000250489 MIF4GDA9UHW6 222 aaKnown RBP27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 SOCS7O14512 581 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 ATMINO43313 823 aaPredicted RBP27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 MAFO75444 373 aaPredicted RBP27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 KRT5P13647 590 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 TNNI1P19237 187 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 TDRD10Q5VZ19 366 aaKnown RBP27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 WHAMMQ8TF30 809 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 ZHX1Q9UKY1 873 aaPredicted RBP27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 ZNFX1Q9P2E3 1918 aaKnown RBP27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 PTPRJQ12913 1337 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 A0A0B4J269 797 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 GRIN3BO60391 1043 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 HLA-DRAP01903 254 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 MREGQ8N565 214 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms