RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 NCAPGQ9BPX3 1015 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 TAF1DQ9H5J8 278 aaPredicted RBP16.95■□□□□ 0.3
LRFN1-201ENST00000248668 SPATA31C2B4DYI2 1134 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 P4HA2O15460 535 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 USP2O75604 605 aaPredicted RBP16.95■□□□□ 0.3
LRFN1-201ENST00000248668 CYP11B1P15538 503 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 RFX1P22670 979 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 GPC5P78333 572 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 MCPH1Q8NEM0 835 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 C12orf42Q96LP6 360 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 ZNF302Q9NR11 478 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 LOXHD1Q8IVV2 1947 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 COMTP21964 271 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 PDE6CP51160 858 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 SCARA3Q6AZY7 606 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 XRRA1Q6P2D8 792 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 SAMD3Q8N6K7 520 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 PSD3Q9NYI0 1048 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 PNMA2Q9UL42 364 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 DOCK1Q14185 1865 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 PHIPQ8WWQ0 1821 aa16.95■□□□□ 0.3
LRFN1-201ENST00000248668 ZNF233A6NK53 670 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 MAFGO15525 162 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 TNFRSF8P28908 595 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 WDR78Q5VTH9 848 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 RDM1Q8NG50 284 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 SHC3Q92529 594 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 ZNF516Q92618 1163 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 FNBP1Q96RU3 617 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 NUP85Q9BW27 656 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 TARS2Q9BW92 718 aaKnown RBP16.94■□□□□ 0.3
LRFN1-201ENST00000248668 SSC5DA1L4H1 1573 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 IBSPP21815 317 aaPredicted RBP16.94■□□□□ 0.3
LRFN1-201ENST00000248668 OAZ1P54368 228 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 DRP2Q13474 957 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.94■□□□□ 0.3
LRFN1-201ENST00000248668 SPIRE2Q8WWL2 714 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 RUBCNQ92622 972 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 SNCAIPQ9Y6H5 919 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 RTN2O75298 545 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 PGK2P07205 417 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 ECHS1P30084 290 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 XKR3Q5GH77 459 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 TRIM50Q86XT4 487 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 RASGEF1CQ8N431 466 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 CDHR1Q96JP9 859 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 SENP7Q9BQF6 1050 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 TRIM7Q9C029 511 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 ISCUQ9H1K1 167 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 ELP3Q9H9T3 547 aa16.94■□□□□ 0.3
LRFN1-201ENST00000248668 PTPRJQ12913 1337 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 RLFQ13129 1914 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 CES2O00748 559 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 SPOPO43791 374 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 DAB2IPQ5VWQ8 1189 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 PASD1Q8IV76 773 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 RHOT2Q8IXI1 618 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 DEPTORQ8TB45 409 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 PIK3R5Q8WYR1 880 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 NTPCRQ9BSD7 190 aaKnown RBP16.93■□□□□ 0.3
LRFN1-201ENST00000248668 PLAAQ9Y263 795 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 STRN3Q13033 797 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 FMNL3Q8IVF7 1028 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 SLC17A8Q8NDX2 589 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 ZNF564Q8TBZ8 553 aaPredicted RBP16.93■□□□□ 0.3
LRFN1-201ENST00000248668 UBLCP1Q8WVY7 318 aaPredicted RBP16.93■□□□□ 0.3
LRFN1-201ENST00000248668 CPA5Q8WXQ8 436 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 CLMNQ96JQ2 1002 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 MFSD14AQ96MC6 490 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 HAPLN2Q9GZV7 340 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 PDLIM7Q9NR12 457 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 TRPC6Q9Y210 931 aa16.93■□□□□ 0.3
LRFN1-201ENST00000248668 MYH9P35579 1960 aaKnown RBP16.93■□□□□ 0.3
LRFN1-201ENST00000248668 OPA1O60313 960 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 EDN1P05305 212 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 UBA1P22314 1058 aaKnown RBP16.92■□□□□ 0.3
LRFN1-201ENST00000248668 GLRA2P23416 452 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 NNTQ13423 1086 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 LY6KQ17RY6 165 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 CEP85LQ5SZL2 805 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 LRRC31Q6UY01 552 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 ARHGAP28Q9P2N2 729 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 CD2APQ9Y5K6 639 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 TCRBV7S2A1N4TA0A589 114 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 TTLL13PA6NNM8 815 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 OATP04181 439 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 C18orf8Q96DM3 657 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 ZBTB10Q96DT7 871 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 CALR3Q96L12 384 aaKnown RBP16.92■□□□□ 0.3
LRFN1-201ENST00000248668 FBXO40Q9UH90 709 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 AGO2Q9UKV8 859 aaKnown RBP16.92■□□□□ 0.3
LRFN1-201ENST00000248668 SYNGAP1Q96PV0 1343 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 K7ERI5 159 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 IRF6O14896 467 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 DKC1O60832 514 aaKnown RBP eCLIP16.92■□□□□ 0.3
LRFN1-201ENST00000248668 GPC3P51654 580 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 BRDTQ58F21 947 aaPredicted RBP16.92■□□□□ 0.3
LRFN1-201ENST00000248668 ALS2CLQ60I27 953 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 ZBTB33Q86T24 672 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms