RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 DEPTORQ8TB45 409 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 LNX1Q8TBB1 728 aaPredicted RBP25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 PPP1R16BQ96T49 567 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 LUC7LQ9NQ29 371 aaKnown RBP25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 FOXN3O00409 490 aaPredicted RBP25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 ELNP15502 786 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 RFX1P22670 979 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 ABCD1P33897 745 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 CETN1Q12798 172 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 IRF5Q13568 498 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 ALKBH5Q6P6C2 394 aaKnown RBP25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 RHPN2Q8IUC4 686 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 SLC30A5Q8TAD4 765 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 RABGGTAQ92696 567 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 FAM213AQ9BRX8 229 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 UBE2TQ9NPD8 197 aaPredicted RBP25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 PPME1Q9Y570 386 aa25.27■■□□□ 1.64
SYNGR3-201ENST00000248121 RRP9O43818 475 aaKnown RBP25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 PIGRP01833 764 aa25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 SRGAP2CP0DJJ0 459 aa25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 LIG4P49917 911 aa25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 MARCH8Q5T0T0 291 aa25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 IER5Q5VY09 327 aa25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 NOX5Q96PH1 765 aa25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 PDCL3Q9H2J4 239 aa25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 SUCLA2Q9P2R7 463 aaPredicted RBP25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 COQ4Q9Y3A0 265 aa25.26■■□□□ 1.63
SYNGR3-201ENST00000248121 BMS1Q14692 1282 aaKnown RBP25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 C10orf76Q5T2E6 689 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 LINC01465Q8N7H1 131 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 RNF149Q8NC42 400 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 PSPC1Q8WXF1 523 aaKnown RBP25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 KAT5Q92993 513 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 TMEM8AQ9HCN3 771 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 K7ERI5 159 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 ZNF185O15231 689 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 STRN3Q13033 797 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 HIC1Q14526 733 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 ZNF484Q5JVG2 852 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 KRT39Q6A163 491 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 ZBTB45Q96K62 511 aaPredicted RBP25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 NLRP4Q96MN2 994 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 ALS2CR12Q96Q35 445 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 SNX12Q9UMY4 172 aa25.25■■□□□ 1.63
SYNGR3-201ENST00000248121 ADCY3O60266 1144 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 F2P00734 622 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 PPFIA1Q13136 1202 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 GRIK4Q16099 956 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 GPR161Q8N6U8 529 aaKnown RBP25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 FAM84AQ96KN4 292 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 MMS19Q96T76 1030 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 CFHR5Q9BXR6 569 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 SETD4Q9NVD3 440 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 CTAGE15A4D2H0 777 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 BTNL10A8MVZ5 291 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 CTAGE8P0CG41 777 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 AKR1A1P14550 325 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 SCP2P22307 547 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 WNT7BP56706 349 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 KIF22Q14807 665 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 CTAGE6Q86UF2 777 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 CTAGE4Q8IX94 777 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 REM2Q8IYK8 340 aaPredicted RBP25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 TARS2Q9BW92 718 aaKnown RBP25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 TMEM134Q9H6X4 195 aa25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.24■■□□□ 1.63
SYNGR3-201ENST00000248121 EXTL3O43909 919 aa25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 NLRP11P59045 1033 aaKnown RBP25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 CACNB2Q08289 660 aaPredicted RBP25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 HSP90AA2PQ14568 343 aaPredicted RBP25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 MTHFD1LQ6UB35 978 aa25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 CRELD2Q6UXH1 353 aaPredicted RBP25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 SV2AQ7L0J3 742 aa25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 GLYCTKQ8IVS8 523 aa25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 TAS1R2Q8TE23 839 aa25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 TCP11Q8WWU5 503 aa25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 TLR10Q9BXR5 811 aa25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 CCDC113Q9H0I3 377 aa25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 PCDHGC5Q9Y5F6 944 aa25.23■■□□□ 1.63
SYNGR3-201ENST00000248121 NCK2O43639 380 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 GAS2O43903 313 aaKnown RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 DLATP10515 647 aaKnown RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 MAP2K2P36507 400 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 CLCN6P51797 869 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 ENPEPQ07075 957 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 CDCA2Q69YH5 1023 aaPredicted RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 VPS36Q86VN1 386 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 NOA1Q8NC60 698 aaKnown RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 CAPZA3Q96KX2 299 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 KREMEN1Q96MU8 473 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 ATP8B3O60423 1300 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 ZNF233A6NK53 670 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 TULP1O00294 542 aaPredicted RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 PDE2AO00408 941 aaPredicted RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 PALMO75781 387 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 VTNP04004 478 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 MYL3P08590 195 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 CCND3P30281 292 aaPredicted RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 GTF2H1P32780 548 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 GPC3P51654 580 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms