RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 STILQ15468 1287 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 C7orf31Q8N865 590 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 KATNAL1Q9BW62 490 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 PLAGL2Q9UPG8 496 aa16.8■□□□□ 0.28
SIN3B-201ENST00000248054 HGSO14964 777 aaPredicted RBP16.79■□□□□ 0.28
SIN3B-201ENST00000248054 IL18RAPO95256 599 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 CHRNA3P32297 505 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 SLC12A2P55011 1212 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 LAMC2Q13753 1193 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 EARS2Q5JPH6 523 aaKnown RBP16.79■□□□□ 0.28
SIN3B-201ENST00000248054 RAD9BQ6WBX8 426 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 EXTL3O43909 919 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 KLHDC7AQ5VTJ3 777 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 CERS5Q8N5B7 392 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 FAM170AA1A519 330 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 ZNF189O75820 626 aaPredicted RBP16.79■□□□□ 0.28
SIN3B-201ENST00000248054 CEP120Q8N960 986 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 OR6B3Q8NGW1 331 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 YIPF3Q9GZM5 350 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 AGPAT3Q9NRZ7 376 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 DDX56Q9NY93 547 aaKnown RBP16.79■□□□□ 0.28
SIN3B-201ENST00000248054 SETSIPP0DME0 302 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 GARSP41250 739 aaKnown RBP16.79■□□□□ 0.28
SIN3B-201ENST00000248054 ZNF677Q86XU0 584 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 OR6J1Q8NGC5 347 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 LRFN2Q9ULH4 789 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 SCN11AQ9UI33 1791 aa16.79■□□□□ 0.28
SIN3B-201ENST00000248054 HUS1O60921 280 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 ACTR2P61160 394 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 NME8Q8N427 588 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 SYTL5Q8TDW5 730 aaPredicted RBP16.78■□□□□ 0.28
SIN3B-201ENST00000248054 ZKSCAN4Q969J2 545 aaPredicted RBP16.78■□□□□ 0.28
SIN3B-201ENST00000248054 PXMP2Q9NR77 195 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 ERAP1Q9NZ08 941 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 EIF3HO15372 352 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■■■□ 22.4
SIN3B-201ENST00000248054 NR1D1P20393 614 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 ADCY2Q08462 1091 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 GPC2Q8N158 579 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 GBP7Q8N8V2 638 aaPredicted RBP16.78■□□□□ 0.28
SIN3B-201ENST00000248054 RANBP17Q9H2T7 1088 aaKnown RBP16.78■□□□□ 0.28
SIN3B-201ENST00000248054 VCX3AQ9NNX9 186 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 PRMT7Q9NVM4 692 aaPredicted RBP16.78■□□□□ 0.28
SIN3B-201ENST00000248054 L1RE1Q9UN81 338 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 SRGAP2O75044 1071 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 KRT7P08729 469 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 DSG3P32926 999 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 PPP2R5CQ13362 524 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 C6orf118Q5T5N4 469 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 DSTYKQ6XUX3 929 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 AP1M1Q9BXS5 423 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 VIPAS39Q9H9C1 493 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 SRGAP2BP0DMP2 458 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 GTF2H1P32780 548 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 GTF2A2P52657 109 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 GRIK5Q16478 980 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 PDCD2LQ9BRP1 358 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 TXLNGQ9NUQ3 528 aa16.78■□□□□ 0.28
SIN3B-201ENST00000248054 WTIPA6NIX2 430 aaPredicted RBP16.77■□□□□ 0.28
SIN3B-201ENST00000248054 MRPS25P82663 173 aaKnown RBP16.77■□□□□ 0.28
SIN3B-201ENST00000248054 SGSM1Q2NKQ1 1148 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 ARL13BQ3SXY8 428 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 ZC2HC1CQ53FD0 456 aaPredicted RBP16.77■□□□□ 0.28
SIN3B-201ENST00000248054 RSRC2Q7L4I2 434 aaKnown RBP16.77■□□□□ 0.28
SIN3B-201ENST00000248054 RHOT1Q8IXI2 618 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 SLC5A5Q92911 643 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 MTMR9Q96QG7 549 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 AGO4Q9HCK5 861 aaKnown RBP16.77■□□□□ 0.28
SIN3B-201ENST00000248054 CYP26B1Q9NR63 512 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 PARVAQ9NVD7 372 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 SLC12A6Q9UHW9 1150 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 ATP8A1Q9Y2Q0 1164 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 TACC3Q9Y6A5 838 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 GCLCP48506 637 aaPredicted RBP16.77■□□□□ 0.28
SIN3B-201ENST00000248054 PPP1R16BQ96T49 567 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 CALN1Q9BXU9 219 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 TBX20Q9UMR3 447 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 PIK3CDO00329 1044 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 CXCL11O14625 94 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 FOXP2O15409 715 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 ATP1A1P05023 1023 aaKnown RBP16.77■□□□□ 0.28
SIN3B-201ENST00000248054 ARP10275 920 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 PLA2G4FQ68DD2 849 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 TMEM143Q96AN5 459 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 ACAP3Q96P50 834 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 C11orf70Q9BRQ4 267 aa16.77■□□□□ 0.28
SIN3B-201ENST00000248054 SLC26A2P50443 739 aa16.77■□□□□ 0.27
SIN3B-201ENST00000248054 DHX34Q14147 1143 aaKnown RBP16.77■□□□□ 0.27
SIN3B-201ENST00000248054 Q3C1V9 767 aa16.77■□□□□ 0.27
SIN3B-201ENST00000248054 NFRKBQ6P4R8 1299 aa16.77■□□□□ 0.27
SIN3B-201ENST00000248054 PCGF5Q86SE9 256 aa16.77■□□□□ 0.27
SIN3B-201ENST00000248054 WDR35Q9P2L0 1181 aa16.77■□□□□ 0.27
SIN3B-201ENST00000248054 HPCAL4Q9UM19 191 aa16.77■□□□□ 0.27
SIN3B-201ENST00000248054 GTPBP10A4D1E9 387 aaKnown RBP16.76■□□□□ 0.27
SIN3B-201ENST00000248054 TMEM253P0C7T8 217 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 SLC7A5Q01650 507 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 SNX1Q13596 522 aa16.76■□□□□ 0.27
SIN3B-201ENST00000248054 NBPF12Q5TAG4 269 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms