RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAB3IP-201ENST00000247833 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
RAB3IP-201ENST00000247833 GAS8O95995 478 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 ICAM1P05362 532 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 RARAP10276 462 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 HSPA6P17066 643 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 PIK3CAP42336 1068 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 NPTX2P47972 431 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 MTMR2Q13614 643 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 BAATQ14032 418 aaPredicted RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 DUPD1Q68J44 220 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 KREMEN1Q96MU8 473 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 STMN4Q9H169 189 aaPredicted RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 WNT8AQ9H1J5 351 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 RAB20Q9NX57 234 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 PFASO15067 1338 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 SCP2P22307 547 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 RFX1P22670 979 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 COILP38432 576 aaPredicted RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 BYSLQ13895 437 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 ZNF394Q53GI3 561 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 TTC27Q6P3X3 843 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 TAOK1Q7L7X3 1001 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 PLEKHO2Q8TD55 490 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 THOC1Q96FV9 657 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 MRIQ9BWK5 157 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 CNOT10Q9H9A5 744 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 AGO4Q9HCK5 861 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 TBC1D22BQ9NU19 505 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 HAUS2Q9NVX0 235 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 MYH11P35749 1972 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 H0YGN5 161 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 TRAPPC3O43617 180 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 IFNB1P01574 187 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 ATF2P15336 505 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 VCAM1P19320 739 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 ALCAMQ13740 583 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 CLUL1Q15846 466 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 SYTL5Q8TDW5 730 aaPredicted RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 RNF25Q96BH1 459 aaPredicted RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 HAUS1Q96CS2 278 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 DDX23Q9BUQ8 820 aaKnown RBP13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 TBX20Q9UMR3 447 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 PCDHB4Q9Y5E5 795 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 NFS1Q9Y697 457 aa13.5□□□□□ -0.25
RAB3IP-201ENST00000247833 FOXO6A8MYZ6 492 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 CLTAP09496 248 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 KYNUQ16719 465 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 SEZ6Q53EL9 994 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 UBAP2Q5T6F2 1119 aaKnown RBP13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 SPOPLQ6IQ16 392 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 TCP11Q8WWU5 503 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 NSRP1Q9H0G5 558 aaKnown RBP13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 FZD1Q9UP38 647 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 PI4K2BG5E9Z4 385 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 CETN2P41208 172 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 STRN3Q13033 797 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 C6orf118Q5T5N4 469 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 STYK1Q6J9G0 422 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 HIBCHQ6NVY1 386 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 SV2AQ7L0J3 742 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 TTLL6Q8N841 843 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 JDP2Q8WYK2 163 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 HVCN1Q96D96 273 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 PWWP2AQ96N64 755 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 RNF146Q9NTX7 359 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 CTNNA2P26232 953 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 ADCY2Q08462 1091 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 SLMAPQ14BN4 828 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 TMEM270Q6UE05 265 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 LRRC34Q8IZ02 419 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 ARHGEF2Q92974 986 aaKnown RBP13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 CD248Q9HCU0 757 aa13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 TTC7AQ9ULT0 858 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.49□□□□□ -0.25
RAB3IP-201ENST00000247833 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 CD58P19256 250 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 RRM1P23921 792 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 MRPS9P82933 396 aaKnown RBP13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 FMO1Q01740 532 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 TBC1D31Q96DN5 1066 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 C9orf72Q96LT7 481 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 RPAP3Q9H6T3 665 aaPredicted RBP13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 HOMER3Q9NSC5 361 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 SLC12A6Q9UHW9 1150 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 ANAPC5Q9UJX4 755 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 CDK5RAP2Q96SN8 1893 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 PPFIA2O75334 1257 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 GJB6O95452 261 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 BRDTQ58F21 947 aaPredicted RBP13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 NUGGCQ68CJ6 796 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 DPH6Q7L8W6 267 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 PARD3BQ8TEW8 1205 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 ATG4CQ96DT6 458 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 ZNF668Q96K58 619 aaPredicted RBP13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 GTF3C4Q9UKN8 822 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 LIN9Q5TKA1 542 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms