RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 KIF28PB7ZC32 967 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 USP17L10C9JJH3 530 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 KRT4P19013 534 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 CYP2C19P33261 490 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 POU5F1BQ06416 359 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 PODNQ7Z5L7 613 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 PDS5AQ29RF7 1337 aaKnown RBP12.12□□□□□ -0.47
NIN-201ENST00000245441 KIAA0391O15091 583 aaKnown RBP12.12□□□□□ -0.47
NIN-201ENST00000245441 PHF2O75151 1096 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 RECQLP46063 649 aaPredicted RBP12.12□□□□□ -0.47
NIN-201ENST00000245441 ULK4Q96C45 1275 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 ZC4H2Q9NQZ6 224 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 HERC5Q9UII4 1024 aaKnown RBP12.12□□□□□ -0.47
NIN-201ENST00000245441 CYP27B1O15528 508 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 SNAP25P60880 206 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 NSUN2Q08J23 767 aaKnown RBP eCLIP12.12□□□□□ -0.47
NIN-201ENST00000245441 CEP55Q53EZ4 464 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 ZBTB41Q5SVQ8 909 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 TTLL6Q8N841 843 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 C7orf25Q9BPX7 421 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 LRRC1Q9BTT6 524 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 DALRD3Q5D0E6 543 aaKnown RBP12.12□□□□□ -0.47
NIN-201ENST00000245441 LRRC8BQ6P9F7 803 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 OR9Q1Q8NGQ5 310 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 KCNF1Q9H3M0 494 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 CYP4F11Q9HBI6 524 aa12.12□□□□□ -0.47
NIN-201ENST00000245441 JPH1Q9HDC5 661 aaPredicted RBP12.12□□□□□ -0.47
NIN-201ENST00000245441 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 FAM47DPA6NHR8 397 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 RNF219Q5W0B1 726 aaPredicted RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 FAM129AQ9BZQ8 928 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 PCSK1NQ9UHG2 260 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 USP15Q9Y4E8 981 aaPredicted RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 SRGNP10124 158 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 IL10P22301 178 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 ELF1P32519 619 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 NARFQ9UHQ1 456 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 INPP5FQ9Y2H2 1132 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 PP2D1A8MPX8 630 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 SYF2O95926 243 aaKnown RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 FDX1P10109 184 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 PRAMEP78395 509 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 CCZ1BP86790 482 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 TTLL4Q14679 1199 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 ELMSAN1Q6PJG2 1045 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 C1orf54Q8WWF1 131 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 ADRA2BP18089 450 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 PGM1P36871 562 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 DPYDQ12882 1025 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 FLOT2Q14254 428 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 KRT33BQ14525 404 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 AGO2Q9UKV8 859 aaKnown RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 PITPNM2Q9BZ72 1349 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 TRIM49P0CI25 452 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 TRIM49CP0CI26 452 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 ACTN3Q08043 901 aaPredicted RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 QRICH1Q2TAL8 776 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 FASTKD1Q53R41 847 aaKnown RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 SGSM3Q96HU1 749 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 AGPAT1Q99943 283 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 HACD3Q9P035 362 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 LSP1P33241 339 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 TRADDQ15628 312 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 P3H1Q32P28 736 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 PPRC1Q5VV67 1664 aaKnown RBP12.11□□□□□ -0.47
NIN-201ENST00000245441 EYA4O95677 639 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 EFNA5P52803 228 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 RCOR2Q8IZ40 523 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 SLC26A7Q8TE54 656 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 EDRF1Q3B7T1 1238 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 RNF217Q8TC41 542 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 GABBR1Q9UBS5 961 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 OVOS2A0A0G2JMS6 1433 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 OVOS2A0A0J9YW53 1432 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 OVOS2Q6IE36 1432 aa12.11□□□□□ -0.47
NIN-201ENST00000245441 ANP32DO95626 131 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 NAA30Q147X3 362 aaPredicted RBP12.1□□□□□ -0.47
NIN-201ENST00000245441 LRRC14Q15048 493 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 CIAPIN1Q6FI81 312 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 NAF1Q96HR8 494 aaKnown RBP12.1□□□□□ -0.47
NIN-201ENST00000245441 YIPF3Q9GZM5 350 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 SRP68Q9UHB9 627 aaKnown RBP12.1□□□□□ -0.47
NIN-201ENST00000245441 TRAF3IP3Q9Y228 551 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 SENP7Q9BQF6 1050 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 CPVLQ9H3G5 476 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 MYO18AQ92614 2054 aaKnown RBP12.1□□□□□ -0.47
NIN-201ENST00000245441 LZICQ8WZA0 190 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 PSMC3IPQ9P2W1 217 aaPredicted RBP12.1□□□□□ -0.47
NIN-201ENST00000245441 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.1□□□□□ -0.47
NIN-201ENST00000245441 STXBP3O00186 592 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 YWHABP31946 246 aaKnown RBP12.1□□□□□ -0.47
NIN-201ENST00000245441 POTEAQ6S8J7 498 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 SZRD1Q7Z422 152 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 SLC35G2Q8TBE7 412 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 CYFIP2Q96F07 1278 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms