RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 BAP1Q92560 729 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 MMS19Q96T76 1030 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 CRISPLD2Q9H0B8 497 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 MINDY3Q9H8M7 445 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 C17orf75Q9HAS0 396 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 NOD1Q9Y239 953 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 LRRC53A6NM62 1247 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 CTSHP09668 335 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 MAPTP10636 758 aaKnown RBP18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 KCNMA1Q12791 1236 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 KIF5AQ12840 1032 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 SYCP3Q8IZU3 236 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 SPIRE2Q8WWL2 714 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 NTPCRQ9BSD7 190 aaKnown RBP18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 PCDHB13Q9Y5F0 798 aa18.41■□□□□ 0.54
CDKN1A-201ENST00000244741 TTLL13PA6NNM8 815 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 CLIC2O15247 247 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 B4GALT4O60513 344 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 PPP1R37O75864 691 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 EDN1P05305 212 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 FGFR4P22455 802 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 GJA8P48165 433 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 PPP2R5AQ15172 486 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 KNOP1Q1ED39 458 aaKnown RBP18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 STRA6Q9BX79 667 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 IFT122Q9HBG6 1241 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 ARHGAP28Q9P2N2 729 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 TBX20Q9UMR3 447 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 PCDHA13Q9Y5I0 950 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 A0A0U1RQG5 324 aaPredicted RBP18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 SMIM35A0A1B0GVV1 85 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 INO80B-WBP1J3KQ70 363 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 IQCF3P0C7M6 154 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 OAS2P29728 719 aaKnown RBP18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 GPC3P51654 580 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 KIF11P52732 1056 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 GTF2BQ00403 316 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 CAPZA3Q96KX2 299 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 OSMRQ99650 979 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 TMEM106CQ9BVX2 250 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 INO80BQ9C086 356 aaPredicted RBP18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 KCTD10Q9H3F6 313 aa18.4■□□□□ 0.54
CDKN1A-201ENST00000244741 ZMYM2Q9UBW7 1377 aa18.39■□□□□ 0.54
CDKN1A-201ENST00000244741 K7ERI5 159 aa18.39■□□□□ 0.53
CDKN1A-201ENST00000244741 CCDC40Q4G0X9 1142 aa18.39■□□□□ 0.53
CDKN1A-201ENST00000244741 NEK11Q8NG66 645 aa18.39■□□□□ 0.53
CDKN1A-201ENST00000244741 SECISBP2LQ93073 1101 aaKnown RBP18.39■□□□□ 0.53
CDKN1A-201ENST00000244741 IFIH1Q9BYX4 1025 aaKnown RBP18.39■□□□□ 0.53
CDKN1A-201ENST00000244741 L1RE1Q9UN81 338 aa18.39■□□□□ 0.53
CDKN1A-201ENST00000244741 ARVCFO00192 962 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 ERLIN1O75477 346 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 LCA5LO95447 670 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 PDXDC1Q6P996 788 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 SERINC5Q86VE9 423 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 TSGA10Q9BZW7 698 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 PCDH10Q9P2E7 1040 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 TULP1O00294 542 aaPredicted RBP18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 ZNF185O15231 689 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 EIF3DO15371 548 aaKnown RBP eCLIP18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 TGFB1I1O43294 461 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 PQBP1O60828 265 aaKnown RBP18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 GPR32O75388 356 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 THPOP40225 353 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 TFDP1Q14186 410 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 STXBP4Q6ZWJ1 553 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 SESTD1Q86VW0 696 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 CDR2LQ86X02 465 aaPredicted RBP18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 BICD1Q96G01 975 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 PAWRQ96IZ0 340 aaKnown RBP18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 CEP63Q96MT8 703 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 ACCSQ96QU6 501 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 DEF6Q9H4E7 631 aa18.38■□□□□ 0.53
CDKN1A-201ENST00000244741 ANO9A1A5B4 782 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 ANKRD63C9JTQ0 380 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 B4GALT5O43286 388 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 PTENP60484 403 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 FAM193AP78312 1265 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 HDXQ7Z353 690 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 TMEM40Q8WWA1 233 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 DHX38Q92620 1227 aaKnown RBP18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 EDEM3Q9BZQ6 932 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 ADAMTS10Q9H324 1103 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 PCIF1Q9H4Z3 704 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 PDE2AO00408 941 aaPredicted RBP18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 ASAP2O43150 1006 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 AKR1B10O60218 316 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 NOL4O94818 638 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 BMT2Q1RMZ1 405 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 TAF2Q6P1X5 1199 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 CACNA2D4Q7Z3S7 1137 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 ZBTB8OSQ8IWT0 167 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 SLC43A3Q8NBI5 491 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 OSBPL7Q9BZF2 842 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 NLRC4Q9NPP4 1024 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 CAPN6Q9Y6Q1 641 aa18.37■□□□□ 0.53
CDKN1A-201ENST00000244741 H3BQF6 201 aa18.36■□□□□ 0.53
CDKN1A-201ENST00000244741 HNRNPDLO14979 420 aaKnown RBP18.36■□□□□ 0.53
CDKN1A-201ENST00000244741 EN2P19622 333 aaPredicted RBP18.36■□□□□ 0.53
CDKN1A-201ENST00000244741 MBTD1Q05BQ5 628 aa18.36■□□□□ 0.53
CDKN1A-201ENST00000244741 STRN3Q13033 797 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms