RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 OPTNQ96CV9 577 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 DRC3Q9H069 523 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 FAM49BQ9NUQ9 324 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 SLAIN2Q9P270 581 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 STX18Q9P2W9 335 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 LRRC63Q05C16 580 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 OR6B3Q8NGW1 331 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 AK8Q96MA6 479 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 ANKZF1Q9H8Y5 726 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 TRIM25Q14258 630 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 CHI3L2Q15782 390 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 MROH9Q5TGP6 573 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 RBM41Q96IZ5 413 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 KIFC3Q9BVG8 833 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 PNMA6FA0A0J9YX94 578 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 FOXO6A8MYZ6 492 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CIAO1O76071 339 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 PMLP29590 882 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 SLC30A10Q6XR72 485 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CARD9Q9H257 536 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 GSG1L2A8MUP6 293 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 FAM86B2P0C5J1 330 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 SIK2Q9H0K1 926 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 XPO7Q9UIA9 1087 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 ATP10AO60312 1499 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 ARL6IP4Q66PJ3 421 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 ACAD11Q709F0 780 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CDR2LQ86X02 465 aaPredicted RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 VPS50Q96JG6 964 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 IVNS1ABPQ9Y6Y0 642 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 SHANK2Q9UPX8 1470 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 TJP3O95049 919 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 NELFEP18615 380 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 CDH6P55285 790 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 DPYDQ12882 1025 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CYLDQ9NQC7 956 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 PACSIN3Q9UKS6 424 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CCND2P30279 289 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CAPN6Q9Y6Q1 641 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 M0QYV0 167 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 ZRANB2O95218 330 aaKnown RBP eCLIP7.95□□□□□ -1.145e-9■■■■■ 100.6
RIF1-201ENST00000243326 MT-CO1P00395 513 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 TRPC1P48995 793 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 ANO5Q75V66 913 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 SIX6OS1Q8N1H7 587 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 DENND3A2RUS2 1198 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 HNRNPCL2B2RXH8 293 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 HNRNPCL1O60812 293 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 CHRNA3P32297 505 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 SERPINB5P36952 375 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 PCSK7Q16549 785 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 FAM102AQ5T9C2 384 aaPredicted RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 B4GALNT2Q8NHY0 566 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 UPF3AQ9H1J1 476 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 PPEF1O14829 653 aaPredicted RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 MAN1A2O60476 641 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 MAPK11Q15759 364 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 TSSK1BQ9BXA7 367 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 DCAF8L1A6NGE4 600 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 CCDC188H7C350 402 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 PDAP1Q13442 181 aaKnown RBP7.95□□□□□ -1.14
RIF1-201ENST00000243326 CASS4Q9NQ75 786 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 ABCA1O95477 2261 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 QRICH2Q9H0J4 1663 aa7.95□□□□□ -1.14
RIF1-201ENST00000243326 GJB6O95452 261 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 PDXDC2PQ6P474 469 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 ZNF341Q9BYN7 854 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 MYO1GB0I1T2 1018 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 OASLQ15646 514 aaKnown RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 AOC3Q16853 763 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 NRBF2Q96F24 287 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 KLHL25Q9H0H3 589 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 C10orf88Q9H8K7 445 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 SYNGAP1Q96PV0 1343 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 FDPSP14324 419 aaKnown RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 NEK2P51955 445 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 IRX1P78414 480 aaPredicted RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 FOXO4P98177 505 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 HIC1Q14526 733 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 THAP11Q96EK4 314 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 STK17AQ9UEE5 414 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 MYO7AQ13402 2215 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 PPP1R3GB7ZBB8 358 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 FGFR3P22607 806 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 TAF1BQ53T94 588 aaPredicted RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 JAMLQ86YT9 394 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 MPP4Q96JB8 637 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 FAM111AQ96PZ2 611 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 MCM8Q9UJA3 840 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 ADGRA2Q96PE1 1338 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 CPDO75976 1380 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 SRGAP2BP0DMP2 458 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 EFHD1Q9BUP0 239 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 GOLGA8QA0A0J9YX86 632 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 GOLGA8OA6NCC3 632 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 GOLGA8NF8WBI6 632 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 PDE5AO76074 875 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 ZFXP17010 805 aaPredicted RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 PPP2R5BQ15173 497 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 ADGRF4Q8IZF3 695 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms