RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ARHGEF26Q96DR7 871 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 THAP2Q9H0W7 228 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 ISCUQ9H1K1 167 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 SUGCTQ9HAC7 445 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 PDE11AQ9HCR9 933 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 L1RE1Q9UN81 338 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 STXBP5LQ9Y2K9 1186 aa19.95■□□□□ 0.78
HOXC11-201ENST00000243082 DIS3Q9Y2L1 958 aaKnown RBP19.95■□□□□ 0.78
HOXC11-201ENST00000243082 TTLL13PA6NNM8 815 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 C4BPAP04003 597 aaKnown RBP19.94■□□□□ 0.78
HOXC11-201ENST00000243082 ZBTB48P10074 688 aaPredicted RBP19.94■□□□□ 0.78
HOXC11-201ENST00000243082 GTF2A2P52657 109 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 CCNA1P78396 465 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 MKRN3Q13064 507 aaKnown RBP19.94■□□□□ 0.78
HOXC11-201ENST00000243082 ZACNQ401N2 412 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 SLC47A2Q86VL8 602 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 SCFD2Q8WU76 684 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 BRI3BPQ8WY22 251 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 PCDHB18PQ96TA0 734 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 PI4K2AQ9BTU6 479 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 MSTO1Q9BUK6 570 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 CCDC113Q9H0I3 377 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 ACP6Q9NPH0 428 aa19.94■□□□□ 0.78
HOXC11-201ENST00000243082 CCL15-CCL14A0A0B4J2E2 113 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 CES2O00748 559 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 MAP2K7O14733 419 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 GAS2O43903 313 aaKnown RBP19.93■□□□□ 0.78
HOXC11-201ENST00000243082 ZC3H11AO75152 810 aaKnown RBP eCLIP19.93■□□□□ 0.78
HOXC11-201ENST00000243082 LDHAP00338 332 aaKnown RBP19.93■□□□□ 0.78
HOXC11-201ENST00000243082 LAMTOR4Q0VGL1 99 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 CCL15Q16663 113 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 CDCA2Q69YH5 1023 aaPredicted RBP19.93■□□□□ 0.78
HOXC11-201ENST00000243082 LRRC71Q8N4P6 559 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 TCP11Q8WWU5 503 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 FNBP1Q96RU3 617 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 LRRC1Q9BTT6 524 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 ANKFY1Q9P2R3 1169 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 PTPRJQ12913 1337 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 FAM170AA1A519 330 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 GRIN3BO60391 1043 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 MSCO60682 206 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 ADORA2AP29274 412 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 MATR3P43243 847 aaKnown RBP eCLIP19.93■□□□□ 0.78
HOXC11-201ENST00000243082 SLC26A2P50443 739 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 EFNA5P52803 228 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 GCNT1Q02742 428 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 TDRD10Q5VZ19 366 aaKnown RBP19.93■□□□□ 0.78
HOXC11-201ENST00000243082 TAPT1Q6NXT6 567 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 NT5DC3Q86UY8 548 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 EXOC8Q8IYI6 725 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 SMARCAD1Q9H4L7 1026 aa19.93■□□□□ 0.78
HOXC11-201ENST00000243082 RBM12Q9NTZ6 932 aaKnown RBP19.93■□□□□ 0.78
HOXC11-201ENST00000243082 RBAKQ9NYW8 714 aaPredicted RBP19.93■□□□□ 0.78
HOXC11-201ENST00000243082 FTLP02792 175 aaPredicted RBP19.92■□□□□ 0.78
HOXC11-201ENST00000243082 TNNI1P19237 187 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 MXD4Q14582 209 aaPredicted RBP19.92■□□□□ 0.78
HOXC11-201ENST00000243082 PTPROQ16827 1216 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 ZPBP2Q6X784 338 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 DAAM2Q86T65 1068 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 SYCE1Q8N0S2 351 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 DHX38Q92620 1227 aaKnown RBP19.92■□□□□ 0.78
HOXC11-201ENST00000243082 TAF4BQ92750 862 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 SUCLA2Q9P2R7 463 aaPredicted RBP19.92■□□□□ 0.78
HOXC11-201ENST00000243082 KCNK3O14649 394 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 BUB1BO60566 1050 aaPredicted RBP19.92■□□□□ 0.78
HOXC11-201ENST00000243082 ZMYND10O75800 440 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 SRGAP2CP0DJJ0 459 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 CYP11B1P15538 503 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 MCM3P25205 808 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 FMO1Q01740 532 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 ARHGAP1Q07960 439 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 TAF3Q5VWG9 929 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 PEX26Q7Z412 305 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 ANKRD23Q86SG2 305 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 HDAC7Q8WUI4 952 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 TRAPPC12Q8WVT3 735 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 MORF4L1Q9UBU8 362 aa19.92■□□□□ 0.78
HOXC11-201ENST00000243082 CNTNAP2Q9UHC6 1331 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 VNN1O95497 513 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 HLA-DRAP01903 254 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 MMEP08473 750 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 GZMAP12544 262 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 MAMDC4Q6UXC1 1216 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 ENOSF1Q7L5Y1 443 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 RNF149Q8NC42 400 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 PBKQ96KB5 322 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 COG5Q9UP83 839 aa19.91■□□□□ 0.78
HOXC11-201ENST00000243082 FAM189A1O60320 539 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 HBP1O60381 514 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 RTN2O75298 545 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 FKBP1BP68106 108 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 SEZ6Q53EL9 994 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 GJC2Q5T442 439 aaPredicted RBP19.9■□□□□ 0.78
HOXC11-201ENST00000243082 ABRAQ8N0Z2 381 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 DDX1Q92499 740 aaKnown RBP19.9■□□□□ 0.78
HOXC11-201ENST00000243082 HES6Q96HZ4 224 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 ACO2Q99798 780 aaKnown RBP19.9■□□□□ 0.78
HOXC11-201ENST00000243082 MRPL4Q9BYD3 311 aaKnown RBP19.9■□□□□ 0.78
HOXC11-201ENST00000243082 UBXN6Q9BZV1 441 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 RNPEPQ9H4A4 650 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms