RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TCTN1Q2MV58 587 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 CEP135Q66GS9 1140 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 E4F1Q66K89 784 aaPredicted RBP14.36□□□□□ -0.11
SLIRP-201ENST00000238688 NYAP1Q6ZVC0 841 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 TMC2Q8TDI7 906 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 PSPC1Q8WXF1 523 aaKnown RBP14.36□□□□□ -0.11
SLIRP-201ENST00000238688 FAM81BQ96LP2 452 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 FBXL18Q96ME1 805 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 USP20Q9Y2K6 914 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 PAXBP1Q9Y5B6 917 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 BZW2Q9Y6E2 419 aaKnown RBP14.36□□□□□ -0.11
SLIRP-201ENST00000238688 STYXL1Q9Y6J8 313 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 MICAL3Q7RTP6 2002 aa14.36□□□□□ -0.11
SLIRP-201ENST00000238688 PRRC2BQ5JSZ5 2229 aaKnown RBP14.35□□□□□ -0.11
SLIRP-201ENST00000238688 SSU72P8A0A1W2PR75 194 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 SLC16A4O15374 487 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 PFKMP08237 780 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 FOSL2P15408 326 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 HOXC8P31273 242 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 RFC2P35250 354 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 KRT83P78385 493 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 POU5F1Q01860 360 aaKnown RBP14.35□□□□□ -0.11
SLIRP-201ENST00000238688 PTPN14Q15678 1187 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 CDCA2Q69YH5 1023 aaPredicted RBP14.35□□□□□ -0.11
SLIRP-201ENST00000238688 ZPBP2Q6X784 338 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 MAFAQ8NHW3 353 aaPredicted RBP14.35□□□□□ -0.11
SLIRP-201ENST00000238688 DEPTORQ8TB45 409 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 NKX2-4Q9H2Z4 354 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 LUC7LQ9NQ29 371 aaKnown RBP14.35□□□□□ -0.11
SLIRP-201ENST00000238688 HSPBP1Q9NZL4 362 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 MYO1AQ9UBC5 1043 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 ATP8B3O60423 1300 aa14.35□□□□□ -0.11
SLIRP-201ENST00000238688 DLL1O00548 723 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 CCDC172P0C7W6 258 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 KCNA1Q09470 495 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 BFSP2Q13515 415 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 ADGRE1Q14246 886 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 MBTPS1Q14703 1052 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 PLCB4Q15147 1175 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 PCBP1Q15365 356 aaKnown RBP eCLIP14.34□□□□□ -0.11
SLIRP-201ENST00000238688 RAB30Q15771 203 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 CACNA2D4Q7Z3S7 1137 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.34□□□□□ -0.11
SLIRP-201ENST00000238688 ZBTB8OSQ8IWT0 167 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 USP38Q8NB14 1042 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 CAGE1Q8TC20 777 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 MTIF3Q9H2K0 278 aaKnown RBP14.34□□□□□ -0.11
SLIRP-201ENST00000238688 MMRN2Q9H8L6 949 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 PPP2R2CQ9Y2T4 447 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 SLC4A7Q9Y6M7 1214 aa14.34□□□□□ -0.11
SLIRP-201ENST00000238688 TTC28Q96AY4 2481 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 EVPLQ92817 2033 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 RRN3P2A6NIE6 340 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 K7ERI5 159 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 HNRNPDLO14979 420 aaKnown RBP14.33□□□□□ -0.12
SLIRP-201ENST00000238688 NBNO60934 754 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 GFPT2O94808 682 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 ARHGEF15O94989 841 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 CXCL10P02778 98 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 LGALS2P05162 132 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 CKBP12277 381 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 TMOD1P28289 359 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 FMO5P49326 533 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 DNTTIP2Q5QJE6 756 aaKnown RBP14.33□□□□□ -0.12
SLIRP-201ENST00000238688 MAEAQ7L5Y9 396 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
SLIRP-201ENST00000238688 C7orf31Q8N865 590 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 EHBP1Q8NDI1 1231 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 CPLX3Q8WVH0 158 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 EEF2KMTQ96G04 330 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 PPP1R13BQ96KQ4 1090 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 KATNAL1Q9BW62 490 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 PRDM12Q9H4Q4 367 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 GPRC5CQ9NQ84 441 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 NOD1Q9Y239 953 aa14.33□□□□□ -0.12
SLIRP-201ENST00000238688 TMEM150BA6NC51 233 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 ZBBXA8MT70 800 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 CLIC2O15247 247 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 RPLP2P05387 115 aaKnown RBP14.32□□□□□ -0.12
SLIRP-201ENST00000238688 SELPP16109 830 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 ATP2A2P16615 1042 aaKnown RBP14.32□□□□□ -0.12
SLIRP-201ENST00000238688 GLRA2P23416 452 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 CYP2J2P51589 502 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 PTK7Q13308 1070 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
SLIRP-201ENST00000238688 KYAT1Q16773 422 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 TCERG1LQ5VWI1 586 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 PDXDC1Q6P996 788 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 LRRC8DQ7L1W4 858 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 GPD1LQ8N335 351 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 BSNDQ8WZ55 320 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 MFSD14AQ96MC6 490 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 FAM207AQ9NSI2 230 aaPredicted RBP14.32□□□□□ -0.12
SLIRP-201ENST00000238688 AIPL1Q9NZN9 384 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 TRPC6Q9Y210 931 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 PCDHA11Q9Y5I1 949 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 ADGRG1Q9Y653 693 aa14.32□□□□□ -0.12
SLIRP-201ENST00000238688 VCANP13611 3396 aa14.31□□□□□ -0.12
SLIRP-201ENST00000238688 ZBTB42B2RXF5 422 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms