RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 STX2P32856 288 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 VAMP7P51809 220 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 CETN1Q12798 172 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 MKRN3Q13064 507 aaKnown RBP16.6■□□□□ 0.25
DDX55-201ENST00000238146 IKQ13123 557 aaPredicted RBP16.6■□□□□ 0.25
DDX55-201ENST00000238146 PPP2R5CQ13362 524 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 C1orf220Q5T0J3 134 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 TRAPPC3LQ5T215 181 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 INTS8Q75QN2 995 aaKnown RBP16.6■□□□□ 0.25
DDX55-201ENST00000238146 KLHL14Q9P2G3 628 aa16.6■□□□□ 0.25
DDX55-201ENST00000238146 BBOX1O75936 387 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 CETPP11597 493 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
DDX55-201ENST00000238146 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
DDX55-201ENST00000238146 RNF43Q68DV7 783 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 APOBEC3HQ6NTF7 200 aaKnown RBP16.59■□□□□ 0.25
DDX55-201ENST00000238146 NSMFQ6X4W1 530 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 SLC47A2Q86VL8 602 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 FAM71AQ8IYT1 594 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 RBM17Q96I25 401 aaKnown RBP16.59■□□□□ 0.25
DDX55-201ENST00000238146 MAGEB18Q96M61 343 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 NACC1Q96RE7 527 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.59■□□□□ 0.259e-7■■■■■ 144.6
DDX55-201ENST00000238146 CHST7Q9NS84 486 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 CYP26A1O43174 497 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 TCEA3O75764 348 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 ITGA8P53708 1063 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 FMO1Q01740 532 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 MYBPC2Q14324 1141 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 MTFR1Q15390 333 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 SEPT14Q6ZU15 432 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 ECHDC2Q86YB7 292 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 DAW1Q8N136 415 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 ATG4AQ8WYN0 398 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 ZNF653Q96CK0 615 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 SNF8Q96H20 258 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 TBK1Q9UHD2 729 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 GTF3C4Q9UKN8 822 aa16.59■□□□□ 0.25
DDX55-201ENST00000238146 P4HA2O15460 535 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 THAP12O43422 761 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 UNC5CO95185 931 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 ATP2A2P16615 1042 aaKnown RBP16.58■□□□□ 0.25
DDX55-201ENST00000238146 SKIV2L2P42285 1042 aaKnown RBP16.58■□□□□ 0.25
DDX55-201ENST00000238146 ATP11AP98196 1134 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 TRIP13Q15645 432 aaPredicted RBP16.58■□□□□ 0.25
DDX55-201ENST00000238146 ANKRD20A2Q5SQ80 823 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 ANKRD20A1Q5TYW2 823 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 ANKRD20A3Q5VUR7 823 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 SPDL1Q96EA4 605 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 PWWP2AQ96N64 755 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 NINJ2Q9NZG7 142 aa16.58■□□□□ 0.25
DDX55-201ENST00000238146 HIP1RO75146 1068 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 NDUFB10O96000 172 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 PRELPP51888 382 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 ICA1Q05084 483 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 ADCY1Q08828 1119 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 RASA3Q14644 834 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 TNIP1Q15025 636 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 ARHGEF18Q6ZSZ5 1173 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 PLEKHO2Q8TD55 490 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 SLC5A5Q92911 643 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 UTP4Q969X6 686 aaKnown RBP16.58■□□□□ 0.24
DDX55-201ENST00000238146 KREMEN1Q96MU8 473 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 TRIM7Q9C029 511 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 KCND2Q9NZV8 630 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 NAALADL1Q9UQQ1 740 aa16.58■□□□□ 0.24
DDX55-201ENST00000238146 ADRA2BP18089 450 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 TAC1P20366 129 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 FOXN2P32314 431 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 CCNG1P51959 295 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 SRRM1Q8IYB3 904 aaKnown RBP16.57■□□□□ 0.24
DDX55-201ENST00000238146 ZSWIM2Q8NEG5 633 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 CBWD1Q9BRT8 395 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 MOV10L1Q9BXT6 1211 aaKnown RBP16.57■□□□□ 0.24
DDX55-201ENST00000238146 ETNK1Q9HBU6 452 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 UVRAGQ9P2Y5 699 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 LGALS13Q9UHV8 139 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 PIK3CDO00329 1044 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 CCDC15Q0P6D6 951 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 ACVR2BQ13705 512 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 PTK6Q13882 451 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 HERPUD2Q9BSE4 406 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 COA1Q9GZY4 146 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 NKIRAS1Q9NYS0 192 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 ADGRA3Q8IWK6 1321 aa16.57■□□□□ 0.24
DDX55-201ENST00000238146 K7ENM7 598 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 GAS7O60861 476 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 SMNDC1O75940 238 aaKnown RBP eCLIP16.56■□□□□ 0.24
DDX55-201ENST00000238146 CCNHP51946 323 aaPredicted RBP16.56■□□□□ 0.24
DDX55-201ENST00000238146 CACNB3P54284 484 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 TCP10Q12799 353 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 TMEM63BQ5T3F8 832 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 GMCL1Q96IK5 515 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 TMEM117Q9H0C3 514 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 ARHGEF10LQ9HCE6 1279 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 MYH11P35749 1972 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 TAF1LQ8IZX4 1826 aa16.56■□□□□ 0.24
DDX55-201ENST00000238146 DDTLA6NHG4 134 aaPredicted RBP16.56■□□□□ 0.24
DDX55-201ENST00000238146 PPP1R12AO14974 1030 aaPredicted RBP16.56■□□□□ 0.24
DDX55-201ENST00000238146 CDH16O75309 829 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms