RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 CRELD2Q6UXH1 353 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-201ENST00000235958 AGMOQ6ZNB7 445 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 SLC9A9Q8IVB4 645 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 TMEM192Q8IY95 271 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 XXYLT1Q8NBI6 393 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 PGBD4Q96DM1 585 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 SAAL1Q96ER3 474 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 TSG101Q99816 390 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 FAM213AQ9BRX8 229 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 KIAA1586Q9HCI6 787 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 RNF216Q9NWF9 866 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-201ENST00000235958 TMEM161AQ9NX61 479 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 PARP2Q9UGN5 583 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 RWDD2AQ9UIY3 292 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 LRFN2Q9ULH4 789 aa11.09□□□□□ -0.63
HMGCL-201ENST00000235958 CITO14578 2027 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 ZNF233A6NK53 670 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 EXTL3O43909 919 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 EXOC3O60645 756 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 NR2F2P24468 414 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 TNFSF9P41273 254 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 CASP4P49662 377 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 FKBP3Q00688 224 aaKnown RBP11.08□□□□□ -0.64
HMGCL-201ENST00000235958 KYAT1Q16773 422 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 SLC10A6Q3KNW5 377 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 ANO6Q4KMQ2 910 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 FAM117BQ6P1L5 589 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 FOXR2Q6PJQ5 311 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 C11orf57Q6ZUT1 292 aaPredicted RBP11.08□□□□□ -0.64
HMGCL-201ENST00000235958 TMCO2Q7Z6W1 182 aaPredicted RBP11.08□□□□□ -0.64
HMGCL-201ENST00000235958 NPAS4Q8IUM7 802 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 HACE1Q8IYU2 909 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 GPD1LQ8N335 351 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 PHOSPHO2Q8TCD6 241 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 NOC3LQ8WTT2 800 aaKnown RBP11.08□□□□□ -0.64
HMGCL-201ENST00000235958 FBXL18Q96ME1 805 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 CCDC94Q9BW85 323 aaPredicted RBP11.08□□□□□ -0.64
HMGCL-201ENST00000235958 SRRTQ9BXP5 876 aaKnown RBP11.08□□□□□ -0.64
HMGCL-201ENST00000235958 DNAJC25Q9H1X3 360 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 MTIF3Q9H2K0 278 aaKnown RBP11.08□□□□□ -0.64
HMGCL-201ENST00000235958 KLK14Q9P0G3 267 aa11.08□□□□□ -0.64
HMGCL-201ENST00000235958 CPSF3Q9UKF6 684 aaKnown RBP11.08□□□□□ -0.64
HMGCL-201ENST00000235958 LACTBL1A8MY62 500 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
HMGCL-201ENST00000235958 CETN3O15182 167 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 MEFVO15553 781 aaPredicted RBP11.07□□□□□ -0.64
HMGCL-201ENST00000235958 OFD1O75665 1012 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 DGKIO75912 1065 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 RECQL4O94761 1208 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 FGFR1P11362 822 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 AFF1P51825 1210 aaKnown RBP11.07□□□□□ -0.64
HMGCL-201ENST00000235958 POU5F1Q01860 360 aaKnown RBP11.07□□□□□ -0.64
HMGCL-201ENST00000235958 ENOX2Q16206 610 aaKnown RBP11.07□□□□□ -0.64
HMGCL-201ENST00000235958 CEP135Q66GS9 1140 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 ALKAL1Q6UXT8 129 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 CBWD2Q8IUF1 395 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 CSGALNACT2Q8N6G5 542 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 ENOX1Q8TC92 643 aaKnown RBP11.07□□□□□ -0.64
HMGCL-201ENST00000235958 FAM212AQ96EL1 285 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 RNPC3Q96LT9 517 aaKnown RBP11.07□□□□□ -0.64
HMGCL-201ENST00000235958 ZFP42Q96MM3 310 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 GAD1Q99259 594 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 NAT10Q9H0A0 1025 aaKnown RBP11.07□□□□□ -0.64
HMGCL-201ENST00000235958 CXCL16Q9H2A7 254 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 RPF1Q9H9Y2 349 aaKnown RBP11.07□□□□□ -0.64
HMGCL-201ENST00000235958 UBN1Q9NPG3 1134 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 MIOSQ9NXC5 875 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 FRMD4BQ9Y2L6 1034 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 GIT1Q9Y2X7 761 aa11.07□□□□□ -0.64
HMGCL-201ENST00000235958 MYO9BQ13459 2157 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 TTC26A0AVF1 554 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 ARL5CA6NH57 179 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 AKAP3O75969 853 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 ADRB2P07550 413 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 CXCL8P10145 99 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 ATP2A2P16615 1042 aaKnown RBP11.06□□□□□ -0.64
HMGCL-201ENST00000235958 PSMC2P35998 433 aaKnown RBP11.06□□□□□ -0.64
HMGCL-201ENST00000235958 ZNF165P49910 485 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 GATMP50440 423 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 YARSP54577 528 aaKnown RBP11.06□□□□□ -0.64
HMGCL-201ENST00000235958 SNRNP35Q16560 246 aaKnown RBP11.06□□□□□ -0.64
HMGCL-201ENST00000235958 CLLU1OSQ5K130 101 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 SPATA1Q5VX52 437 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 LRSAM1Q6UWE0 723 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 GLB1LQ6UWU2 654 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 FILIP1Q7Z7B0 1213 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 HERC6Q8IVU3 1022 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 ZC3H3Q8IXZ2 948 aaKnown RBP11.06□□□□□ -0.64
HMGCL-201ENST00000235958 GSTCDQ8NEC7 633 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 HELQQ8TDG4 1101 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 MFSD14AQ96MC6 490 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 CASD1Q96PB1 797 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 ZBED2Q9BTP6 218 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 RSAD1Q9HA92 442 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 PLEKHA5Q9HAU0 1116 aa11.06□□□□□ -0.64
HMGCL-201ENST00000235958 SMIM28A0A1B0GU29 152 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 GRXCR1A8MXD5 290 aa11.05□□□□□ -0.64
HMGCL-201ENST00000235958 HOXA2O43364 376 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms