RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 BIN2Q9UBW5 565 aaPredicted RBP16.86■□□□□ 0.29
DDX1-201ENST00000233084 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 BZW2Q9Y6E2 419 aaKnown RBP16.86■□□□□ 0.29
DDX1-201ENST00000233084 NPHP3-ACAD11A0A0J9YXS1 232 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 T-ENOLP0DO92 83 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 TAC1P20366 129 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 MCL1Q07820 350 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 CMPK2Q5EBM0 449 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 CIAPIN1Q6FI81 312 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 NEK8Q86SG6 692 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 NCAPG2Q86XI2 1143 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 SAP30BPQ9UHR5 308 aaKnown RBP16.86■□□□□ 0.29
DDX1-201ENST00000233084 INTUQ9ULD6 942 aa16.86■□□□□ 0.29
DDX1-201ENST00000233084 TTC7AQ9ULT0 858 aaPredicted RBP16.86■□□□□ 0.29
DDX1-201ENST00000233084 hCG_2014768A0A024R1R8 64 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 COQ9O75208 318 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 FGRP09769 529 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 YBX3P16989 372 aaKnown RBP eCLIP16.85■□□□□ 0.298e-7■□□□□ 8.9
DDX1-201ENST00000233084 ERFP50548 548 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 CERKLQ49MI3 558 aaPredicted RBP16.85■□□□□ 0.29
DDX1-201ENST00000233084 PRELID2Q8N945 189 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 MAGEB18Q96M61 343 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 DNAAF2Q9NVR5 837 aaKnown RBP16.85■□□□□ 0.29
DDX1-201ENST00000233084 BARHL2Q9NY43 387 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 PITPNM2Q9BZ72 1349 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 ROBO3Q96MS0 1386 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 FZD9O00144 591 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 ZSCAN9O15535 394 aaPredicted RBP16.85■□□□□ 0.29
DDX1-201ENST00000233084 KRT36O76013 467 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 PON1P27169 355 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 TPP2P29144 1249 aaPredicted RBP16.85■□□□□ 0.29
DDX1-201ENST00000233084 MARCKSL1P49006 195 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 CCDC15Q0P6D6 951 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 RRP1BQ14684 758 aaKnown RBP16.85■□□□□ 0.29
DDX1-201ENST00000233084 AGBL3Q8NEM8 1001 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 SPIRE2Q8WWL2 714 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 DMAP1Q9NPF5 467 aaPredicted RBP16.85■□□□□ 0.29
DDX1-201ENST00000233084 GALNT8Q9NY28 637 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 USP20Q9Y2K6 914 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 SIPA1L1O43166 1804 aa16.85■□□□□ 0.29
DDX1-201ENST00000233084 SIGLEC16A6NMB1 481 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 PHF2O75151 1096 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 TJP3O95049 919 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 GSTA2P09210 222 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 DRG2P55039 364 aaKnown RBP16.84■□□□□ 0.29
DDX1-201ENST00000233084 CTTNQ14247 550 aaKnown RBP16.84■□□□□ 0.29
DDX1-201ENST00000233084 MYBPC3Q14896 1274 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 CALCRLQ16602 461 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 WASHC2DQ5SRD0 308 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 DSTYKQ6XUX3 929 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 ZDHHC14Q8IZN3 488 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 ARHGEF26Q96DR7 871 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 CARD9Q9H257 536 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 TMEM260Q9NX78 707 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 STK17AQ9UEE5 414 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 CHORDC1Q9UHD1 332 aaPredicted RBP16.84■□□□□ 0.29
DDX1-201ENST00000233084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
DDX1-201ENST00000233084 TCRBV7S2A1N4TA0A589 114 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 SMCO2A6NFE2 343 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 CAPN9O14815 690 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 ATP5HO75947 161 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 FAM163BP0C2L3 166 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 NR2F2P24468 414 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 NFIAQ12857 509 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 PICALMQ13492 652 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 ECM1Q16610 540 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 ARHGEF18Q6ZSZ5 1173 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 LNX1Q8TBB1 728 aaPredicted RBP16.84■□□□□ 0.29
DDX1-201ENST00000233084 KRT35Q92764 455 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 CEP63Q96MT8 703 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 VAT1LQ9HCJ6 419 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 USH1CQ9Y6N9 552 aa16.84■□□□□ 0.29
DDX1-201ENST00000233084 MAPK13O15264 365 aa16.83■□□□□ 0.29
DDX1-201ENST00000233084 SPAG7O75391 227 aa16.83■□□□□ 0.29
DDX1-201ENST00000233084 MKRN3Q13064 507 aaKnown RBP16.83■□□□□ 0.29
DDX1-201ENST00000233084 ACVR2BQ13705 512 aa16.83■□□□□ 0.29
DDX1-201ENST00000233084 PPP2R5EQ16537 467 aa16.83■□□□□ 0.29
DDX1-201ENST00000233084 KYNUQ16719 465 aa16.83■□□□□ 0.29
DDX1-201ENST00000233084 CNPY1Q3B7I2 92 aa16.83■□□□□ 0.29
DDX1-201ENST00000233084 TAF1BQ53T94 588 aaPredicted RBP16.83■□□□□ 0.29
DDX1-201ENST00000233084 HERC4Q5GLZ8 1057 aaPredicted RBP16.83■□□□□ 0.29
DDX1-201ENST00000233084 CTNNBL1Q8WYA6 563 aaPredicted RBP16.83■□□□□ 0.29
DDX1-201ENST00000233084 INPP5DQ92835 1189 aa16.83■□□□□ 0.29
DDX1-201ENST00000233084 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.29
DDX1-201ENST00000233084 ROPN1BQ9BZX4 212 aaPredicted RBP16.83■□□□□ 0.29
DDX1-201ENST00000233084 ROPN1Q9HAT0 212 aaPredicted RBP16.83■□□□□ 0.29
DDX1-201ENST00000233084 PARP2Q9UGN5 583 aa16.83■□□□□ 0.29
DDX1-201ENST00000233084 PHTF1Q9UMS5 762 aa16.83■□□□□ 0.29
DDX1-201ENST00000233084 A0A0A6YYK5 440 aaPredicted RBP16.83■□□□□ 0.28
DDX1-201ENST00000233084 GNA14O95837 355 aa16.83■□□□□ 0.28
DDX1-201ENST00000233084 IMPDH2P12268 514 aa16.83■□□□□ 0.28
DDX1-201ENST00000233084 VCAM1P19320 739 aa16.83■□□□□ 0.28
DDX1-201ENST00000233084 MARK3P27448 753 aa16.83■□□□□ 0.28
DDX1-201ENST00000233084 CACNB3P54284 484 aa16.83■□□□□ 0.28
DDX1-201ENST00000233084 RFX8Q6ZV50 586 aa16.83■□□□□ 0.28
DDX1-201ENST00000233084 DTNBP1Q96EV8 351 aa16.83■□□□□ 0.28
DDX1-201ENST00000233084 RUNDC3BQ96NL0 473 aa16.83■□□□□ 0.28
DDX1-201ENST00000233084 PLEKHG4BQ96PX9 1271 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms