RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SLC29A2Q14542 456 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 TTC27Q6P3X3 843 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 HS2ST1Q7LGA3 356 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 LMNTD2Q8IXW0 634 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 DAW1Q8N136 415 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 CHMP6Q96FZ7 201 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 BTBD6Q96KE9 485 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 DDX23Q9BUQ8 820 aaKnown RBP10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 MTFR1LQ9H019 292 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 SEMA4AQ9H3S1 761 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 ECT2Q9H8V3 914 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 FRMD4BQ9Y2L6 1034 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 ANKRD62A6NC57 917 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 KIAA0391O15091 583 aaKnown RBP10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 CYP3A4P08684 503 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 BFSP1Q12934 665 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 SLC15A2Q16348 729 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 ANKRD20A2Q5SQ80 823 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 ANKRD20A1Q5TYW2 823 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 ANKRD20A3Q5VUR7 823 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 PRELID2Q8N945 189 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 ACER1Q8TDN7 264 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 EZH1Q92800 747 aaPredicted RBP10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 ITFG2Q969R8 447 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 TLCD1Q96CP7 247 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 GMCL1Q96IK5 515 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 AGPAT1Q99943 283 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 UNC45AQ9H3U1 944 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 DLGAP2Q9P1A6 1054 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 CTTNBP2NLQ9P2B4 639 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 DPPA5A6NC42 116 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 ANKRD63C9JTQ0 380 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 GAS7O60861 476 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 ATP4AP20648 1035 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 RPL21P46778 160 aaKnown RBP10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 GCLMP48507 274 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 PMS2P54278 862 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 PPP3CAQ08209 521 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 CCDC25Q86WR0 208 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 LRRC34Q8IZ02 419 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 GMCL1P1Q8NEA9 526 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 FBF1Q8TES7 1133 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 RAB17Q9H0T7 212 aa10.08□□□□□ -0.8
HLA-DOA-201ENST00000229829 EMSYQ7Z589 1322 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 MGRN1O60291 552 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 ECEL1O95672 775 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 CHN1P15882 459 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 ATP2A2P16615 1042 aaKnown RBP10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 PTGIRP43119 386 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 KCNJ1P48048 391 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 RNASELQ05823 741 aaKnown RBP10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 MAPK7Q13164 816 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 XRCC4Q13426 336 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 MESDQ14696 234 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 CCDC6Q16204 474 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 PCDHB18PQ96TA0 734 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 MKNK1Q9BUB5 465 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 ADAM7Q9H2U9 754 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 TUFT1Q9NNX1 390 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 KCNK9Q9NPC2 374 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 INTS9Q9NV88 658 aaKnown RBP10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 GRHL1Q9NZI5 618 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 RPTORQ8N122 1335 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 SRRM3A6NNA2 597 aaPredicted RBP10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 SMNDC1O75940 238 aaKnown RBP eCLIP10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 DRD4P21917 467 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 FGFR4P22455 802 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 PRELPP51888 382 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 ZNF131P52739 623 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 ZYXQ15942 572 aaKnown RBP10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 PDCD2Q16342 344 aaPredicted RBP10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 ZC3H12AQ5D1E8 599 aaKnown RBP10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 HHATQ5VTY9 493 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 POP1Q99575 1024 aaKnown RBP10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 CBWD1Q9BRT8 395 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 AZI2Q9H6S1 392 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 PTPN22Q9Y2R2 807 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 C2CD2Q9Y426 696 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 SCN9AQ15858 1988 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 ATP8B3O60423 1300 aa10.07□□□□□ -0.8
HLA-DOA-201ENST00000229829 PAEPP09466 180 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 RAD23BP54727 409 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 KIF22Q14807 665 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 ERMARDQ5T6L9 678 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 CDCA2Q69YH5 1023 aaPredicted RBP10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 TMEM154Q6P9G4 183 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 PLEKHO2Q8TD55 490 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 SLC5A5Q92911 643 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 XPO6Q96QU8 1125 aaKnown RBP10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 LXNQ9BS40 222 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 IDI2Q9BXS1 227 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 PABPC3Q9H361 631 aaKnown RBP10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 TMEM150BA6NC51 233 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 C5orf60A6NFR6 353 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 SGPL1O95470 568 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 LINGO3P0C6S8 592 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 PYGMP11217 842 aa10.06□□□□□ -0.8
HLA-DOA-201ENST00000229829 COMTP21964 271 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms