RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 TBX3O15119 743 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 NR1I2O75469 434 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 SP9P0CG40 484 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 GLULP15104 373 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 POU5F1BQ06416 359 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 MMRN1Q13201 1228 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
FRG1-201ENST00000226798 USP41Q3LFD5 358 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 ZC3H14Q6PJT7 736 aaKnown RBP12.88□□□□□ -0.35
FRG1-201ENST00000226798 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
FRG1-201ENST00000226798 NEK8Q86SG6 692 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 PALB2Q86YC2 1186 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 C1orf210Q8IVY1 113 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 PJA1Q8NG27 643 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 MTRQ99707 1265 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 PHF20Q9BVI0 1012 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 COLEC11Q9BWP8 271 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 SLKQ9H2G2 1235 aaPredicted RBP12.88□□□□□ -0.35
FRG1-201ENST00000226798 PIDD1Q9HB75 910 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 ADAM28Q9UKQ2 775 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 SIT1Q9Y3P8 196 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 ZFP37Q9Y6Q3 630 aaPredicted RBP12.88□□□□□ -0.35
FRG1-201ENST00000226798 MED19A0JLT2 244 aaPredicted RBP12.87□□□□□ -0.35
FRG1-201ENST00000226798 INO80B-WBP1J3KQ70 363 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 CPLX1O14810 134 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 ZMYND10O75800 440 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 ARF4P18085 180 aaPredicted RBP12.87□□□□□ -0.35
FRG1-201ENST00000226798 RPL17P18621 184 aaKnown RBP12.87□□□□□ -0.35
FRG1-201ENST00000226798 EMP3P54852 163 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 STARD6P59095 220 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 CREMQ03060 361 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 GRIK3Q13003 919 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 CAPSQ13938 189 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 XKR9Q5GH70 373 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 DCLRE1AQ6PJP8 1040 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 OTUD6AQ7L8S5 288 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 KIAA2013Q8IYS2 634 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 MAML2Q8IZL2 1156 aaPredicted RBP12.87□□□□□ -0.35
FRG1-201ENST00000226798 FGF14Q92915 247 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 ZNF274Q96GC6 653 aaPredicted RBP12.87□□□□□ -0.35
FRG1-201ENST00000226798 DYDC2Q96IM9 177 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 APOL6Q9BWW8 343 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 NFKBIZQ9BYH8 718 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 FOXQ1Q9C009 403 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 ZSWIM4Q9H7M6 989 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 FBXW11Q9UKB1 542 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 KCNJ14Q9UNX9 436 aa12.87□□□□□ -0.35
FRG1-201ENST00000226798 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 B4GALT5O43286 388 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 CCNT1O60563 726 aaKnown RBP12.86□□□□□ -0.35
FRG1-201ENST00000226798 FSHRP23945 695 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 ARL2P36404 184 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 CYP4A11Q02928 519 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 NCBP1Q09161 790 aaKnown RBP12.86□□□□□ -0.35
FRG1-201ENST00000226798 TFDP1Q14186 410 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 CTTNQ14247 550 aaKnown RBP12.86□□□□□ -0.35
FRG1-201ENST00000226798 RTP2Q5QGT7 225 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 NCAPH2Q6IBW4 605 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 DGLUCYQ7Z3D6 616 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 GLYCTKQ8IVS8 523 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 HACE1Q8IYU2 909 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 SUMF1Q8NBK3 374 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 ASAP3Q8TDY4 903 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 RUBCNQ92622 972 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 RPP25Q9BUL9 199 aaKnown RBP12.86□□□□□ -0.35
FRG1-201ENST00000226798 DDX23Q9BUQ8 820 aaKnown RBP12.86□□□□□ -0.35
FRG1-201ENST00000226798 TRIM6Q9C030 488 aaPredicted RBP12.86□□□□□ -0.35
FRG1-201ENST00000226798 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
FRG1-201ENST00000226798 LAMA1P25391 3075 aa12.86□□□□□ -0.35
FRG1-201ENST00000226798 SF3B1O75533 1304 aaKnown RBP eCLIP12.86□□□□□ -0.35
FRG1-201ENST00000226798 A0A1B0GUA9 196 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 LRRN2O75325 713 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 SLITRK3O94933 977 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 LYPLA2O95372 231 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 AKAP5P24588 427 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 HSP90AA2PQ14568 343 aaPredicted RBP12.85□□□□□ -0.35
FRG1-201ENST00000226798 PUM1Q14671 1186 aaKnown RBP eCLIP12.85□□□□□ -0.35
FRG1-201ENST00000226798 SLC27A1Q6PCB7 646 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 PRSS55Q6UWB4 352 aaPredicted RBP12.85□□□□□ -0.35
FRG1-201ENST00000226798 PARM1Q6UWI2 310 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 ST13P5Q8NFI4 369 aaPredicted RBP12.85□□□□□ -0.35
FRG1-201ENST00000226798 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 NAP1L4Q99733 375 aaKnown RBP12.85□□□□□ -0.35
FRG1-201ENST00000226798 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 DLL3Q9NYJ7 618 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 CACNG4Q9UBN1 327 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 CDH7Q9ULB5 785 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 STK36Q9NRP7 1315 aa12.85□□□□□ -0.35
FRG1-201ENST00000226798 CHD6Q8TD26 2715 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 DGAT1O75907 488 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 REC8O95072 547 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 NPTXRO95502 500 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 POU2F2P09086 479 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 HNRNPA1P09651 372 aaKnown RBP eCLIP12.84□□□□□ -0.35
FRG1-201ENST00000226798 GLRA2P23416 452 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 HOXA9P31269 272 aa12.84□□□□□ -0.35
FRG1-201ENST00000226798 GPC5P78333 572 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms