RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 HSP90AA5PQ58FG0 334 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 FGD4Q96M96 766 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 FAM118BQ9BPY3 351 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 ETNK1Q9HBU6 452 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 FGFR1OP2Q9NVK5 253 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 CHORDC1Q9UHD1 332 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-201ENST00000225983 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■□ 21
HDAC5-201ENST00000225983 MDM2Q00987 491 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-201ENST00000225983 KIF19Q2TAC6 998 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 ATL2Q8NHH9 583 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 TMEM117Q9H0C3 514 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 PRKCBP05771 671 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 KLRC1P26715 233 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 TOB1P50616 345 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-201ENST00000225983 ARFIP2P53365 341 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 COPS2P61201 443 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 RSBN1LQ6PCB5 846 aaPredicted RBP17.13■□□□□ 0.33
HDAC5-201ENST00000225983 REXO1L1PQ8IX06 675 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 CDC26Q8NHZ8 85 aa17.13■□□□□ 0.33
HDAC5-201ENST00000225983 A0A1W2PQJ5 194 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 PHF2O75151 1096 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 PPP1R37O75864 691 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 PAMP19021 973 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 MDH1P40925 334 aaKnown RBP17.12■□□□□ 0.33
HDAC5-201ENST00000225983 SH3BGRP55822 239 aaPredicted RBP17.12■□□□□ 0.33
HDAC5-201ENST00000225983 POLE2P56282 527 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 KRT80Q6KB66 452 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 HHIPL2Q6UWX4 724 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 TTC1Q99614 292 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 MRPL46Q9H2W6 279 aaKnown RBP17.12■□□□□ 0.33
HDAC5-201ENST00000225983 EHD2Q9NZN4 543 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 GOLGA8RI6L899 631 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 LONRF1Q17RB8 773 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 DDX42Q86XP3 938 aaKnown RBP eCLIP17.12■□□□□ 0.33
HDAC5-201ENST00000225983 CATSPER3Q86XQ3 398 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 GTSE1Q9NYZ3 720 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 TAC1P20366 129 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 THEM5Q8N1Q8 247 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 POLRMTO00411 1230 aaKnown RBP17.12■□□□□ 0.33
HDAC5-201ENST00000225983 DGAT1O75907 488 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 LCP1P13796 627 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 ERVK-24P63145 666 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 P3H1Q32P28 736 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 CELF4Q9BZC1 486 aaKnown RBP17.12■□□□□ 0.33
HDAC5-201ENST00000225983 VIPAS39Q9H9C1 493 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 STAP1Q9ULZ2 295 aa17.12■□□□□ 0.33
HDAC5-201ENST00000225983 SLC1A1P43005 524 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 CARSP49589 748 aaKnown RBP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 CCNYL1Q8N7R7 359 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 GPR75-ASB3A0A0A6YYF3 556 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 CHUKO15111 745 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 HSPA9P38646 679 aaKnown RBP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 NSUN2Q08J23 767 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 HIF1AQ16665 826 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 RUBCNQ92622 972 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 DBR1Q9UK59 544 aaKnown RBP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 SALL3Q9BXA9 1300 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 TCP11X1B4DZS4 312 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 AP5Z1O43299 807 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 DIAPH2O60879 1101 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 FDX1P10109 184 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 EIF3EP60228 445 aaKnown RBP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 RASSF3Q86WH2 238 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 ZNF70Q9UC06 446 aaPredicted RBP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 AP3M2P53677 418 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 C1orf146Q5VVC0 180 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 NUDCD3Q8IVD9 361 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 CFAP69A5D8W1 941 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 ATP5HO75947 161 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 CHN1P15882 459 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 RPA1P27694 616 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 XKR3Q5GH77 459 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 TRMT10CQ7L0Y3 403 aaKnown RBP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 ELOA2Q8IYF1 753 aaPredicted RBP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 ALKBH8Q96BT7 664 aaKnown RBP17.11■□□□□ 0.33
HDAC5-201ENST00000225983 ATXN7L3BQ96GX2 97 aa17.11■□□□□ 0.33
HDAC5-201ENST00000225983 PPFIA2O75334 1257 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 POU5F1BQ06416 359 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 KLHDC7AQ5VTJ3 777 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 CDKL3Q8IVW4 592 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-201ENST00000225983 SUCLA2Q9P2R7 463 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-201ENST00000225983 UVRAGQ9P2Y5 699 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 EIF4E1BA6NMX2 242 aaKnown RBP17.1■□□□□ 0.33
HDAC5-201ENST00000225983 KPNA7A9QM74 516 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 MOCS2O96007 188 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-201ENST00000225983 CHEK2O96017 543 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 GNAT1P11488 350 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 EFNA5P52803 228 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 EPC2Q52LR7 807 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 PDCD6IPQ8WUM4 868 aaKnown RBP17.1■□□□□ 0.33
HDAC5-201ENST00000225983 C9orf72Q96LT7 481 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 ENTPD3O75355 529 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 NR3C2P08235 984 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 CYP2C19P33261 490 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 GRB10Q13322 594 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 COG2Q14746 738 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 EFHC2Q5JST6 749 aa17.1■□□□□ 0.33
HDAC5-201ENST00000225983 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms