RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 CEP63Q96MT8 703 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 ACAP3Q96P50 834 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 SLC9A7Q96T83 725 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 FAM213AQ9BRX8 229 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 NXF3Q9H4D5 531 aaKnown RBP14.35□□□□□ -0.11
TIMP1-201ENST00000218388 RPF1Q9H9Y2 349 aaKnown RBP14.35□□□□□ -0.11
TIMP1-201ENST00000218388 DMAC2Q9NW81 257 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 PCDH10Q9P2E7 1040 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 PARP2Q9UGN5 583 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 GIT1Q9Y2X7 761 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 CITO14578 2027 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 TTC3P53804 2025 aa14.35□□□□□ -0.11
TIMP1-201ENST00000218388 RALGAPA2Q2PPJ7 1873 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 EPB41P11171 864 aaKnown RBP14.34□□□□□ -0.11
TIMP1-201ENST00000218388 PMS1P54277 932 aaKnown RBP14.34□□□□□ -0.11
TIMP1-201ENST00000218388 ZNF445P59923 1031 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 OSTNP61366 133 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 CEP135Q66GS9 1140 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.34□□□□□ -0.11
TIMP1-201ENST00000218388 C11orf57Q6ZUT1 292 aaPredicted RBP14.34□□□□□ -0.11
TIMP1-201ENST00000218388 USP37Q86T82 979 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 ZNF598Q86UK7 904 aaKnown RBP14.34□□□□□ -0.11
TIMP1-201ENST00000218388 CD302Q8IX05 232 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 ABI1Q8IZP0 508 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 ENOX1Q8TC92 643 aaKnown RBP14.34□□□□□ -0.11
TIMP1-201ENST00000218388 PHOSPHO2Q8TCD6 241 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 SAAL1Q96ER3 474 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 RNPC3Q96LT9 517 aaKnown RBP14.34□□□□□ -0.11
TIMP1-201ENST00000218388 FBXL18Q96ME1 805 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 GDF15Q99988 308 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 BPIFA3Q9BQP9 254 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 MKNK1Q9BUB5 465 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 APOL6Q9BWW8 343 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 HAPLN2Q9GZV7 340 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 TSPY26PQ9H489 355 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 RSAD1Q9HA92 442 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 SNTG2Q9NY99 539 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 HES2Q9Y543 173 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 SLC4A7Q9Y6M7 1214 aa14.34□□□□□ -0.11
TIMP1-201ENST00000218388 GOLGA8IPA6NC78 632 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 GOLGA8JA6NMD2 632 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 SMTNL1A8MU46 457 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 MAPK13O15264 365 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 SLC16A3O15427 465 aaKnown RBP14.33□□□□□ -0.12
TIMP1-201ENST00000218388 FAM189A1O60320 539 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 RECQL4O94761 1208 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 GNA14O95837 355 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 PSMC2P35998 433 aaKnown RBP14.33□□□□□ -0.12
TIMP1-201ENST00000218388 ACOT2P49753 483 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 ZNF165P49910 485 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 MYL5Q02045 173 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 PPP2R3AQ06190 1150 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 SURF1Q15526 300 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 SNRNP35Q16560 246 aaKnown RBP14.33□□□□□ -0.12
TIMP1-201ENST00000218388 SPATA1Q5VX52 437 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 GLB1LQ6UWU2 654 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 FAM114A1Q8IWE2 563 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 ZC3H3Q8IXZ2 948 aaKnown RBP14.33□□□□□ -0.12
TIMP1-201ENST00000218388 CEP120Q8N960 986 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 URGCPQ8TCY9 931 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 TOP1MTQ969P6 601 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 RPS6KC1Q96S38 1066 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
TIMP1-201ENST00000218388 RBAKQ9NYW8 714 aaPredicted RBP14.33□□□□□ -0.12
TIMP1-201ENST00000218388 CPSF3Q9UKF6 684 aaKnown RBP14.33□□□□□ -0.12
TIMP1-201ENST00000218388 PDE4DIPQ5VU43 2346 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 BECN2A8MW95 431 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 UPP2O95045 317 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 IL18RAPO95256 599 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 CXCL8P10145 99 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 KRT13P13646 458 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 ATF7P17544 494 aaPredicted RBP14.32□□□□□ -0.12
TIMP1-201ENST00000218388 AKAP5P24588 427 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 BMP8BP34820 402 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 TNFSF9P41273 254 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 DEFB103AP81534 67 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 SEZ6Q53EL9 994 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 AGMOQ6ZNB7 445 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 LRRC55Q6ZSA7 311 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 INTS8Q75QN2 995 aaKnown RBP14.32□□□□□ -0.12
TIMP1-201ENST00000218388 FILIP1Q7Z7B0 1213 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 BRSK2Q8IWQ3 736 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 FAM186BQ8IYM0 893 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 RDH13Q8NBN7 331 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 LPPQ93052 612 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 TSPAN18Q96SJ8 248 aa14.32□□□□□ -0.12
TIMP1-201ENST00000218388 DUSP9Q99956 384 aaKnown RBP14.32□□□□□ -0.12
TIMP1-201ENST00000218388 METTL14Q9HCE5 456 aaKnown RBP14.32□□□□□ -0.12
TIMP1-201ENST00000218388 MAGEC2Q9UBF1 373 aaPredicted RBP14.32□□□□□ -0.12
TIMP1-201ENST00000218388 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.32□□□□□ -0.12
TIMP1-201ENST00000218388 IKBKBO14920 756 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 ATP2A2P16615 1042 aaKnown RBP14.31□□□□□ -0.12
TIMP1-201ENST00000218388 TPM4P67936 248 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 ENPEPQ07075 957 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 ENOX2Q16206 610 aaKnown RBP14.31□□□□□ -0.12
TIMP1-201ENST00000218388 CCDC40Q4G0X9 1142 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 ZBTB41Q5SVQ8 909 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 RASIP1Q5U651 963 aa14.31□□□□□ -0.12
TIMP1-201ENST00000218388 CRELD2Q6UXH1 353 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms