RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ATF7P17544 494 aaPredicted RBP29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 AKAP5P24588 427 aa29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 MYBPC2Q14324 1141 aa29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 SPATA1Q5VX52 437 aa29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 CRELD2Q6UXH1 353 aaPredicted RBP29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 ZC3H3Q8IXZ2 948 aaKnown RBP29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 PARP2Q9UGN5 583 aa29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 FRMD4BQ9Y2L6 1034 aa29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 NFE2L3Q9Y4A8 694 aa29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 MICAL3Q7RTP6 2002 aa29.68■■■□□ 2.34
CHMP4B-201ENST00000217402 AKAP3O75969 853 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 BAIAP3O94812 1187 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 SNRNP35Q16560 246 aaKnown RBP29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 HACE1Q8IYU2 909 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 TMEM174Q8WUU8 243 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 CBX8Q9HC52 389 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 CPSF3Q9UKF6 684 aaKnown RBP29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 ZNF623O75123 536 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 RECQL4O94761 1208 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 CLTAP09496 248 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 ITGA4P13612 1032 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 WDR5P61964 334 aaKnown RBP29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 FAM189BP81408 668 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 HSP90AA4PQ58FG1 418 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 DHX40Q8IX18 779 aaKnown RBP29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 FBXL18Q96ME1 805 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 ACAP3Q96P50 834 aa29.67■■■□□ 2.34
CHMP4B-201ENST00000217402 EFCAB14O75071 495 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 CAVIN2O95810 425 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 ADRB2P07550 413 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 CXCL8P10145 99 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 KCNJ6P48051 423 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 DEFB103AP81534 67 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 MRPL10Q7Z7H8 261 aaKnown RBP29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 ZNF598Q86UK7 904 aaKnown RBP29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 FAM200AQ8TCP9 573 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 CEP63Q96MT8 703 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 KIAA1586Q9HCI6 787 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 RBAKQ9NYW8 714 aaPredicted RBP29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 CEP290O15078 2479 aa29.66■■■□□ 2.34
CHMP4B-201ENST00000217402 ENOX2Q16206 610 aaKnown RBP29.65■■■□□ 2.34
CHMP4B-201ENST00000217402 KYAT1Q16773 422 aa29.65■■■□□ 2.34
CHMP4B-201ENST00000217402 LUZP1Q86V48 1076 aa29.65■■■□□ 2.34
CHMP4B-201ENST00000217402 PGBD4Q96DM1 585 aa29.65■■■□□ 2.34
CHMP4B-201ENST00000217402 RPF1Q9H9Y2 349 aaKnown RBP29.65■■■□□ 2.34
CHMP4B-201ENST00000217402 TMEM161AQ9NX61 479 aa29.65■■■□□ 2.34
CHMP4B-201ENST00000217402 KLK14Q9P0G3 267 aa29.65■■■□□ 2.34
CHMP4B-201ENST00000217402 LRFN2Q9ULH4 789 aa29.65■■■□□ 2.34
CHMP4B-201ENST00000217402 ZNF233A6NK53 670 aa29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 BECN2A8MW95 431 aa29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 AMHP03971 560 aa29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 PSMC2P35998 433 aaKnown RBP29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 YARSP54577 528 aaKnown RBP29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 NCAPHQ15003 741 aa29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 IQCB1Q15051 598 aa29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 AGMOQ6ZNB7 445 aa29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 FAM186BQ8IYM0 893 aa29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 FAM212AQ96EL1 285 aa29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 SAMSN1Q9NSI8 373 aaKnown RBP29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 CXXC1Q9P0U4 656 aaPredicted RBP29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 PCDHB7Q9Y5E2 793 aa29.64■■■□□ 2.34
CHMP4B-201ENST00000217402 TNRC18O15417 2968 aaPredicted RBP29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 UPP2O95045 317 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 FGFR1OPO95684 399 aaKnown RBP29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 EPB41P11171 864 aaKnown RBP29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 TMCO2Q7Z6W1 182 aaPredicted RBP29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 RNF214Q8ND24 703 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 FANCLQ9NW38 375 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 IKBKBO14920 756 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 SLC16A3O15427 465 aaKnown RBP29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 MEFVO15553 781 aaPredicted RBP29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 EOMESO95936 686 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 FGFR1P11362 822 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 CCDC40Q4G0X9 1142 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 FILIP1Q7Z7B0 1213 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 CREBRFQ8IUR6 639 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 BRSK2Q8IWQ3 736 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 HERVK_113Q902F9 699 aa29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 ELAC1Q9H777 363 aaKnown RBP29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 TOPORSQ9NS56 1045 aaPredicted RBP29.63■■■□□ 2.33
CHMP4B-201ENST00000217402 SMTNL1A8MU46 457 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 MLH1P40692 756 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 WNT7BP56706 349 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 HSP90AA2PQ14568 343 aaPredicted RBP29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 SLC10A6Q3KNW5 377 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 NPAS4Q8IUM7 802 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 SNX27Q96L92 541 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 MKNK1Q9BUB5 465 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 CXCL16Q9H2A7 254 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 THAP9Q9H5L6 903 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 RSAD1Q9HA92 442 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 RNF19AQ9NV58 838 aa29.62■■■□□ 2.33
CHMP4B-201ENST00000217402 MLLT1Q03111 559 aaPredicted RBP29.61■■■□□ 2.33
CHMP4B-201ENST00000217402 PPP2R3AQ06190 1150 aa29.61■■■□□ 2.33
CHMP4B-201ENST00000217402 CYP24A1Q07973 514 aa29.61■■■□□ 2.33
CHMP4B-201ENST00000217402 C9orf50Q5SZB4 431 aa29.61■■■□□ 2.33
CHMP4B-201ENST00000217402 FAM117BQ6P1L5 589 aa29.61■■■□□ 2.33
CHMP4B-201ENST00000217402 CNOT6LQ96LI5 555 aaKnown RBP29.61■■■□□ 2.33
CHMP4B-201ENST00000217402 ZFP42Q96MM3 310 aa29.61■■■□□ 2.33
CHMP4B-201ENST00000217402 GAS2L3Q86XJ1 694 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms