RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 SGPL1O95470 568 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 ITGA4P13612 1032 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 SCTRP47872 440 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 NPTX2P47972 431 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 RWDD2BP57060 319 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 FAM47CQ5HY64 1035 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 FBXO16Q8IX29 292 aaPredicted RBP13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 ZNF483Q8TF39 744 aaPredicted RBP13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 LENG9Q96B70 501 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 A1CFQ9NQ94 594 aaKnown RBP13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 NAGPAQ9UK23 515 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 PITPNM2Q9BZ72 1349 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 TARSL2A2RTX5 802 aaKnown RBP13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 RASSF10A6NK89 507 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 FAM107AO95990 144 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 FAM153BP0C7A2 387 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 TMEM191BP0C7N4 346 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 TAF11Q15544 211 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 FAM153CQ494X1 144 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 EMBQ6PCB8 327 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 FRMD5Q7Z6J6 570 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 HOOK3Q86VS8 718 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 TATDN2Q93075 761 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 SEC16BQ96JE7 1060 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 TMEM206Q9H813 350 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 FAM153AQ9UHL3 310 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 AJAP1Q9UKB5 411 aaPredicted RBP13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 VAV3Q9UKW4 847 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 TBX3O15119 743 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 SNUPNO95149 360 aaKnown RBP13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 SOX5P35711 763 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 CLK2P49760 499 aaKnown RBP13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 BRDTQ58F21 947 aaPredicted RBP13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 ARHGEF19Q8IW93 802 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 PXMP2Q9NR77 195 aa13.82□□□□□ -0.2
PCDHB4-201ENST00000194152 ASTN1O14525 1302 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 ANO9A1A5B4 782 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 ZNF233A6NK53 670 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 DAPK3O43293 454 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 TGFB1I1O43294 461 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 WEE2P0C1S8 567 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 PTPRAP18433 802 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 PPP3CAQ08209 521 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 FSTL1Q12841 308 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 UAP1Q16222 522 aaPredicted RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 Q4G0T1 1027 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 SCYL2Q6P3W7 929 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 C1orf186Q6ZWK4 172 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 ZNF365Q70YC5 407 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 PALB2Q86YC2 1186 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 KIF2BQ8N4N8 673 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 C7orf31Q8N865 590 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 KIFAP3Q92845 792 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 RNF25Q96BH1 459 aaPredicted RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 HSD17B14Q9BPX1 270 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 AGO4Q9HCK5 861 aaKnown RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 MLXIPLQ9NP71 852 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 ANAPC7Q9UJX3 599 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 BTAF1O14981 1849 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 CACNA1SQ13698 1873 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 F5H423 210 aaPredicted RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 KRT76Q01546 638 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 ORC2Q13416 577 aaPredicted RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 CCDC60Q8IWA6 550 aaPredicted RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 C1orf54Q8WWF1 131 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 LPAR1Q92633 364 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 ATP6V1G3Q96LB4 118 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 ELAC2Q9BQ52 826 aaKnown RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 POLR3CQ9BUI4 534 aaPredicted RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 PRM3Q9NNZ6 103 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 DNM1LO00429 736 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 CLDN3O15551 220 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 NT5C2P49902 561 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 SESN3P58005 492 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 TREML2Q5T2D2 321 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 INTS8Q75QN2 995 aaKnown RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 SLC47A2Q86VL8 602 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 ZNF513Q8N8E2 541 aaPredicted RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 MDM1Q8TC05 714 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 BAP1Q92560 729 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 SPATA33Q96N06 139 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 NAP1L3Q99457 506 aaPredicted RBP13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 MTFR1LQ9H019 292 aa13.81□□□□□ -0.2
PCDHB4-201ENST00000194152 TTI1O43156 1089 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 MAPK4P31152 587 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 NSFP46459 744 aaKnown RBP13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 CLCN3P51790 818 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 MFAP3P55082 362 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 AMPD2Q01433 879 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 TMEM132BQ14DG7 1078 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 NBPF20Q3BBV1 942 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 SLC30A9Q6PML9 568 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 FHDC1Q9C0D6 1143 aaPredicted RBP13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 KCTD10Q9H3F6 313 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 NOP53Q9NZM5 478 aaKnown RBP13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 APEX2Q9UBZ4 518 aa13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 CNOT8Q9UFF9 292 aaKnown RBP13.8□□□□□ -0.2
PCDHB4-201ENST00000194152 MYH10P35580 1976 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms