RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 LRMDAQ9H2I8 198 aa16.06■□□□□ 0.16
PDZD4-201ENST00000164640 CHCHD3Q9NX63 227 aaKnown RBP16.06■□□□□ 0.16
PDZD4-201ENST00000164640 BAZ2AQ9UIF9 1905 aaKnown RBP16.06■□□□□ 0.16
PDZD4-201ENST00000164640 NBPF5PQ86XG9 351 aaPredicted RBP16.06■□□□□ 0.16
PDZD4-201ENST00000164640 HIPK4Q8NE63 616 aa16.06■□□□□ 0.16
PDZD4-201ENST00000164640 AKAP11Q9UKA4 1901 aa16.06■□□□□ 0.16
PDZD4-201ENST00000164640 ACADSP16219 412 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 LRRC74BQ6ZQY2 392 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 SYT2Q8N9I0 419 aaPredicted RBP16.05■□□□□ 0.16
PDZD4-201ENST00000164640 ANKRD27Q96NW4 1050 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 CIB2O75838 187 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 KRT5P13647 590 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 YY1P25490 414 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 FMO5P49326 533 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 DRG2P55039 364 aaKnown RBP16.05■□□□□ 0.16
PDZD4-201ENST00000164640 TMEM119Q4V9L6 283 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 ZNF34Q8IZ26 560 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 RBM41Q96IZ5 413 aaKnown RBP16.05■□□□□ 0.16
PDZD4-201ENST00000164640 CHST7Q9NS84 486 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 MAGEA13PA6NCF6 341 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 RASA1P20936 1047 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 PTPN4P29074 926 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 COG2Q14746 738 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 USH1GQ495M9 461 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 OLFML2BQ68BL8 750 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 TRIM74Q86UV6 250 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 TRIM73Q86UV7 250 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 RUSC1Q9BVN2 902 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 DNAJC18Q9H819 358 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 NINJ2Q9NZG7 142 aa16.05■□□□□ 0.16
PDZD4-201ENST00000164640 ARHGAP42A6NI28 874 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 GNAZP19086 355 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 IZUMO3Q5VZ72 239 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 LVRNQ6Q4G3 990 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 SLC30A10Q6XR72 485 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 ART4Q93070 314 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 GPR101Q96P66 508 aaPredicted RBP16.04■□□□□ 0.16
PDZD4-201ENST00000164640 RBM15Q96T37 977 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDZD4-201ENST00000164640 CCDC87Q9NVE4 849 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 HEY2Q9UBP5 337 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 SH3BP1Q9Y3L3 701 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 MYH1P12882 1939 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 MYH4Q9Y623 1939 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 CCDC22O60826 627 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 ZBED4O75132 1171 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 FGRP09769 529 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 GCLMP48507 274 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 PARP6Q2NL67 630 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 C2CD6Q53TS8 623 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 WASHC2DQ5SRD0 308 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 CYFIP1Q7L576 1253 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 MAML1Q92585 1016 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 ITFG2Q969R8 447 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 ELMO3Q96BJ8 720 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 NDNQ99608 321 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 LRP6O75581 1613 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 PDXKO00764 312 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 WFS1O76024 890 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 CCNB1P14635 433 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 PGM1P36871 562 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 SNAP25P60880 206 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 MFSD5Q6N075 450 aa16.04■□□□□ 0.16
PDZD4-201ENST00000164640 DRAXINQ8NBI3 349 aaPredicted RBP16.04■□□□□ 0.16
PDZD4-201ENST00000164640 LARSQ9P2J5 1176 aaKnown RBP16.04■□□□□ 0.16
PDZD4-201ENST00000164640 E7ENQ6 273 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 OAS1P00973 400 aaKnown RBP16.03■□□□□ 0.16
PDZD4-201ENST00000164640 ITIH2P19823 946 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 IL6STP40189 918 aaPredicted RBP16.03■□□□□ 0.16
PDZD4-201ENST00000164640 SKIV2L2P42285 1042 aaKnown RBP16.03■□□□□ 0.16
PDZD4-201ENST00000164640 MCL1Q07820 350 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 TMED1Q13445 227 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 LBRQ14739 615 aaKnown RBP16.03■□□□□ 0.16
PDZD4-201ENST00000164640 PARP10Q53GL7 1025 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 FAM178BQ8IXR5 827 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 HAS1Q92839 578 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 OPTNQ96CV9 577 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 DDX27Q96GQ7 796 aaKnown RBP16.03■□□□□ 0.16
PDZD4-201ENST00000164640 CRAMP1Q96RY5 1269 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 ANAPC7Q9UJX3 599 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 ZNF148Q9UQR1 794 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 RABGAP1Q9Y3P9 1069 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 MAPK4P31152 587 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 KCNQ4P56696 695 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 MAP7Q14244 749 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 IZUMO2Q6UXV1 221 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 CCDC127Q96BQ5 260 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 HAUS1Q96CS2 278 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 NMD3Q96D46 503 aaKnown RBP16.03■□□□□ 0.16
PDZD4-201ENST00000164640 CENPKQ9BS16 269 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 PCMTD2Q9NV79 361 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 APEX2Q9UBZ4 518 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 PCYOX1Q9UHG3 505 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 ERVV-1B6SEH8 477 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 ATF7P17544 494 aaPredicted RBP16.03■□□□□ 0.16
PDZD4-201ENST00000164640 RPA3P35244 121 aaPredicted RBP16.03■□□□□ 0.16
PDZD4-201ENST00000164640 PPATQ06203 517 aa16.03■□□□□ 0.16
PDZD4-201ENST00000164640 PKN2Q16513 984 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms