RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 ATP8A1Q9Y2Q0 1164 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 IQGAP1P46940 1657 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 MED24O75448 989 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 RHOBTB3O94955 611 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 TJP3O95049 919 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 NXNQ6DKJ4 435 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
PKP2-201ENST00000070846 ZNF564Q8TBZ8 553 aaPredicted RBP12.13□□□□□ -0.47
PKP2-201ENST00000070846 HDAC11Q96DB2 347 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 ABHD10Q9NUJ1 306 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 CALCOCO1Q9P1Z2 691 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 SYNGAP1Q96PV0 1343 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 SRGAP2O75044 1071 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 FMO5P49326 533 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 NOP14P78316 857 aaKnown RBP12.13□□□□□ -0.47
PKP2-201ENST00000070846 SYT2Q8N9I0 419 aaPredicted RBP12.13□□□□□ -0.47
PKP2-201ENST00000070846 ASIC4Q96FT7 647 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 PI4K2AQ9BTU6 479 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 NT5C1AQ9BXI3 368 aa12.13□□□□□ -0.47
PKP2-201ENST00000070846 CYBBP04839 570 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 KRT3P12035 628 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 CDC25BP30305 580 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 SLC26A2P50443 739 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 ZNF131P52739 623 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 ACVR2BQ13705 512 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 CXCL17Q6UXB2 119 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 HPDLQ96IR7 371 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 RBM41Q96IZ5 413 aaKnown RBP12.12□□□□□ -0.47
PKP2-201ENST00000070846 RUNDC3BQ96NL0 473 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 NUP85Q9BW27 656 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 MRIQ9BWK5 157 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 FSD1LQ9BXM9 530 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 NMRK2Q9NPI5 230 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 LSM7Q9UK45 103 aaKnown RBP12.12□□□□□ -0.47
PKP2-201ENST00000070846 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 GAKO14976 1311 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 F5H423 210 aaPredicted RBP12.12□□□□□ -0.47
PKP2-201ENST00000070846 ALDH1A3P47895 512 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 BEX3Q00994 111 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 AMHR2Q16671 573 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 PCNX4Q63HM2 1172 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 DCP1BQ8IZD4 617 aaKnown RBP12.12□□□□□ -0.47
PKP2-201ENST00000070846 NUDCD1Q96RS6 583 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 TAF1DQ9H5J8 278 aaPredicted RBP12.12□□□□□ -0.47
PKP2-201ENST00000070846 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.12□□□□□ -0.47
PKP2-201ENST00000070846 TLK1Q9UKI8 766 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 PPLO60437 1756 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 GRAP2O75791 330 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 PGK1P00558 417 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 CDH6P55285 790 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 MRPS25P82663 173 aaKnown RBP12.12□□□□□ -0.47
PKP2-201ENST00000070846 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 TRIM72Q6ZMU5 477 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
PKP2-201ENST00000070846 SLC30A5Q8TAD4 765 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 DNAJB3Q8WWF6 145 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 PBKQ96KB5 322 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 SLITRK1Q96PX8 696 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 RUSC1Q9BVN2 902 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 SENP6Q9GZR1 1112 aaPredicted RBP12.12□□□□□ -0.47
PKP2-201ENST00000070846 C17orf75Q9HAS0 396 aa12.12□□□□□ -0.47
PKP2-201ENST00000070846 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
PKP2-201ENST00000070846 GOLGA4Q13439 2230 aaKnown RBP12.11□□□□□ -0.47
PKP2-201ENST00000070846 OGTO15294 1046 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 PALMO75781 387 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 ITGB3P05106 788 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 PDGFRAP16234 1089 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 DNAJB2P25686 324 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
PKP2-201ENST00000070846 ZNF211Q13398 564 aaPredicted RBP12.11□□□□□ -0.47
PKP2-201ENST00000070846 IQCB1Q15051 598 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 PGM5Q15124 567 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 C15orf52Q6ZUT6 534 aaKnown RBP12.11□□□□□ -0.47
PKP2-201ENST00000070846 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 TRAPPC12Q8WVT3 735 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 BHMTQ93088 406 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 COLEC11Q9BWP8 271 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 UBQLN1Q9UMX0 589 aaKnown RBP12.11□□□□□ -0.47
PKP2-201ENST00000070846 PPFIA4O75335 1185 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 IL18RAPO95256 599 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 KRT7P08729 469 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 SKIP12755 728 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 SCP2P22307 547 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 SOX5P35711 763 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 TAF6P49848 677 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 TPD52P55327 224 aaPredicted RBP12.11□□□□□ -0.47
PKP2-201ENST00000070846 DAGLBQ8NCG7 672 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 CHMP6Q96FZ7 201 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
PKP2-201ENST00000070846 MTG1Q9BT17 334 aaPredicted RBP12.11□□□□□ -0.47
PKP2-201ENST00000070846 SP110Q9HB58 689 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 TBX20Q9UMR3 447 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 NR2E3Q9Y5X4 410 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 DEPDC5O75140 1603 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 MIF4GDA9UHW6 222 aaKnown RBP12.11□□□□□ -0.47
PKP2-201ENST00000070846 EDRF1Q3B7T1 1238 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 SV2CQ496J9 727 aa12.11□□□□□ -0.47
PKP2-201ENST00000070846 ATP8B4Q8TF62 1192 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms