RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 TAB3Q8N5C8 712 aaPredicted RBP21.46■■□□□ 1.03
PPP1R3F-201ENST00000055335 AGPAT3Q9NRZ7 376 aa21.46■■□□□ 1.03
PPP1R3F-201ENST00000055335 GNAT1P11488 350 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 PEX5P50542 639 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 TMEM154Q6P9G4 183 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 APBB1IPQ7Z5R6 666 aaPredicted RBP21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 PIDD1Q9HB75 910 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 DLGAP2Q9P1A6 1054 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 PCDHA3Q9Y5H8 950 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 ITGB4P16144 1822 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 MFSD5Q6N075 450 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 ANKLE1Q8NAG6 615 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 SLC5A5Q92911 643 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 CNKSR1Q969H4 720 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 ALG13Q9NP73 1137 aaKnown RBP21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 DDX4Q9NQI0 724 aaKnown RBP21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 CPSF2Q9P2I0 782 aaKnown RBP21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 TAC1P20366 129 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 POLE2P56282 527 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 SPIRE1Q08AE8 756 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 LLGL2Q6P1M3 1020 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 ASRGL1Q7L266 308 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 FAM13CQ8NE31 585 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 DTX3LQ8TDB6 740 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 ZBTB21Q9ULJ3 1066 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 PHTF1Q9UMS5 762 aa21.45■■□□□ 1.02
PPP1R3F-201ENST00000055335 GTPBP10A4D1E9 387 aaKnown RBP21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 O00370 1275 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 GM2AP17900 193 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 CETN1Q12798 172 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 ZNF365Q70YC5 407 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 RNPEPL1Q9HAU8 725 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 NINJ2Q9NZG7 142 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 DCCP43146 1447 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 SSTR3P32745 418 aaPredicted RBP21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 BFSP1Q12934 665 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 GPATCH4Q5T3I0 446 aaKnown RBP21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 ANO7Q6IWH7 933 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 ZSWIM2Q8NEG5 633 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 ETNPPLQ8TBG4 499 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 RPS6KC1Q96S38 1066 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 CCDC77Q9BR77 488 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 TBC1D10AQ9BXI6 508 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 USTQ9Y2C2 406 aa21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 ATF5Q9Y2D1 282 aaPredicted RBP21.44■■□□□ 1.02
PPP1R3F-201ENST00000055335 NEFHP12036 1026 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 CALB2P22676 271 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 GPSM2P81274 684 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 MTFR1Q15390 333 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 WNT8AQ9H1J5 351 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 MEIS2O14770 477 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 MAP3K13O43283 966 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 RBBP5Q15291 538 aaKnown RBP21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 CLUL1Q15846 466 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 SLC30A9Q6PML9 568 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 CYFIP1Q7L576 1253 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 MAGEB18Q96M61 343 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 ANAPC7Q9UJX3 599 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 CHKBQ9Y259 395 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 SHANK3Q9BYB0 1731 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 EXOC1LA0A1B0GW35 172 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 CA4P22748 312 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 NOP9Q86U38 636 aaKnown RBP21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 BORCS6Q96GS4 357 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 SNF8Q96H20 258 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 FAM84AQ96KN4 292 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 TMEM109Q9BVC6 243 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 KIAA1551Q9HCM1 1747 aa21.43■■□□□ 1.02
PPP1R3F-201ENST00000055335 KIF3CO14782 793 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 GAS8O95995 478 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 CFBP00751 764 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 PTDSS1P48651 473 aaKnown RBP21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 OVGP1Q12889 678 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 PTF1AQ7RTS3 328 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 DAGLAQ9Y4D2 1042 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 K7ENM7 598 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 EYA4O95677 639 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 KRT5P13647 590 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 TM4SF1P30408 202 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 ALDH3A1P30838 453 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 RFC5P40937 340 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 WDR4P57081 412 aaKnown RBP21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 PPP3CAQ08209 521 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 SLC10A5Q5PT55 438 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 SLFN13Q68D06 897 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 PPP1R18Q6NYC8 613 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 CNBD1Q8NA66 436 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 TEKT4Q8WW24 435 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 NAP1L4Q99733 375 aaKnown RBP21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 VPS37BQ9H9H4 285 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 KLHL11Q9NVR0 708 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 EEF2P13639 858 aaKnown RBP21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 KAZNQ674X7 775 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 STK32AQ8WU08 396 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 NPHS2Q9NP85 383 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 KCNQ5Q9NR82 932 aa21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 R3HDM2Q9Y2K5 976 aaKnown RBP21.42■■□□□ 1.02
PPP1R3F-201ENST00000055335 MAPK13O15264 365 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 PEX11AO75192 247 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms