RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Oog4Q4G0C7 502 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 ChukQ60680 745 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Plekha4Q8VC98 588 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fads3Q9JJE7 449 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Cyp39a1Q9JKJ9 470 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Hebp1Q9R257 190 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Map3k15A2AQW0 1331 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Frmd7A2AD83 703 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Hoxb8P09632 243 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Ifnar1P33896 590 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Ap5z1Q3U829 807 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Slc2a13Q3UHK1 637 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Stip1Q60864 543 aaKnown RBP16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Zfp418Q8BFS8 652 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 CenpuQ8C4M7 410 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Msi2Q920Q6 346 aaKnown RBP16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Zmynd10Q99ML0 440 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Nt5c3aQ9D020 331 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Gm3460E9QAI8 215 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Gm3424L7N298 263 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Gm8246M0QWX9 263 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Pdcd2P46718 343 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 WhrnQ80VW5 918 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Fbxw7Q8VBV4 629 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 BrdtQ91Y44 956 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Alg1Q921Q3 482 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 C1qtnf1Q9QXP7 281 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Iqgap1Q9JKF1 1657 aaKnown RBP16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Ankfn1A0A140LIW7 1083 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Nccrp1G3X9C2 266 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Tdpoz4Q6YCH2 370 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Dnajc5gQ8C632 165 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 OafQ8QZR4 282 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Paip2bQ91W45 136 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 GrapQ9CX99 217 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Trappc3O55013 180 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Tex11Q14AT2 947 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Foxred2Q3USW5 665 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Cyfip2Q5SQX6 1253 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Smarca1Q6PGB8 1046 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 SgczQ8BX51 311 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Vmn1r191Q8K4D0 298 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Scyl3Q9DBQ7 735 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Atp11cQ9QZW0 1129 aa16.39■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 FscbA1EGX6 1074 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Rabgap1lA6H6A9 815 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 A430078G23RikE9Q7Y4 484 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 CraddO88843 199 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Arpp19P56212 112 aaKnown RBP16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Irx2P81066 474 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Tcf12Q61286 706 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Grin3bQ91ZU9 1003 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Plagl2Q925T4 496 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Nme9A0A1L1SUL6 329 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Nrg3O35181 713 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Sco1Q5SUC9 284 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Tfdp2Q64163 446 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Q8BGD0 127 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Tmem120aQ8C1E7 343 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Slc2a5Q9WV38 501 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Nfx1B1AY10 1114 aaKnown RBP16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Klc2O88448 599 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 FntaQ61239 377 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Usp49Q6P9L4 685 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Ints2Q80UK8 1198 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 E4f1Q8CCE9 783 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Btbd7Q8CFE5 1130 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Ciapin1Q8WTY4 309 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 NptxrQ99J85 493 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Ddx56Q9D0R4 546 aaKnown RBP16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Mad2l2Q9D752 211 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Dgcr8Q9EQM6 773 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Adam7O35227 789 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Cyp2c67Q569X9 491 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Ccdc90bQ8C3X2 256 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 P3h2Q8CG71 703 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Ndufv1Q91YT0 464 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 CtsfQ9R013 462 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Pth1rP41593 591 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Trim43cP86449 446 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Pbxip1Q3TVI8 727 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Phka2Q8BWJ3 1235 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Trpv6Q91WD2 767 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Abcf2Q99LE6 628 aaKnown RBP16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Sugt1Q9CX34 336 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Krt16Q9Z2K1 469 aa16.38■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Ahdc1Q6PAL7 1594 aaKnown RBP16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Iqcj-Schip1A0A088MLT8 559 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Gm13084A2A8N0 494 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 TprnA2AI08 749 aaKnown RBP16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Schip1P0DPB4 484 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 BC051142Q3V0M8 400 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Stxbp2Q64324 593 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Galnt5Q8C102 930 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Trip10Q8CJ53 603 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 AmotQ8VHG2 1126 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Mettl13Q91YR5 698 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Micu3Q9CTY5 523 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Coro7Q9D2V7 922 aa16.37■□□□□ 0.21
Pcdha9-201ENSMUST00000115659 Dnajc7Q9QYI3 494 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 163.8 ms