RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Krt87Q6IMF0 495 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 GmipQ6PGG2 971 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Tyw3Q8BSA9 257 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Zhx2Q8C0C0 836 aaKnown RBP9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Tgif2lx2Q8K5B9 231 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Tbrg4Q91YM4 630 aaKnown RBP9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Lrrc57Q9D1G5 239 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Galnt15Q9D2N8 638 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 FignQ9ERZ6 759 aa9.39□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Adgrb1Q3UHD1 1582 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Pcdh11xF6ZNL5 1338 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gm4297D3YWB7 211 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Tekt5G5E8A8 557 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gm21962L7N280 338 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Man1a2P39098 641 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Rnf10Q3UIW5 804 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Myo19Q5SV80 963 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ccdc125Q5U465 500 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Zfp90Q61967 636 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ptpn14Q62130 1189 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Rexo4Q6PAQ4 432 aaKnown RBP9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Llgl1Q80Y17 1036 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ccdc134Q8C7V8 229 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Znf830Q8R1N0 363 aaKnown RBP9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 MmadhcQ99LS1 296 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Lrp2bpQ9D4C6 346 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Noa1Q9JJG9 693 aaKnown RBP9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gfpt2Q9Z2Z9 682 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Zmynd8A2A484 1235 aaKnown RBP9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gm3264L7N2C5 238 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Axin2O88566 840 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 PorP37040 678 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Pon1P52430 355 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 TchpQ3TVW5 497 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Peg10Q7TN75 958 aaKnown RBP9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Enoph1Q8BGB7 257 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Pnpt1Q8K1R3 783 aaKnown RBP9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ankrd49Q8VE42 238 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Fam192aQ91WE2 254 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Serpinb3bQ9D1Q5 387 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Map1bP14873 2464 aaKnown RBP9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Cfap221A9Q751 836 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Nr1i3O35627 358 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Cst8P32766 142 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Syt2P46097 422 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Cd37Q61470 281 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Arhgap30Q640N3 1101 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Supt20hQ7TT00 530 aaKnown RBP9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 GancQ8BVW0 898 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ldlrap1Q8C142 308 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Irak4Q8R4K2 459 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Cbwd1Q8VEH6 393 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 CtsqQ91ZF4 343 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Apobec3Q99J72 440 aaKnown RBP9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ddx25Q9QY15 484 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Lactbl1S4R213 581 aa9.38□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gm7168A0AUV4 508 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Tmem132bF7BAB2 1078 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Esr2O08537 530 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Pex5O09012 639 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 CopeO89079 308 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gja8P28236 440 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Rpl13P47963 211 aaKnown RBP9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Trim43bP86448 445 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 HdxQ14B70 692 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Rrp36Q3UFY0 244 aaKnown RBP9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Nsrp1Q5NCR9 542 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gm5622Q810Q0 167 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Slc4a7Q8BTY2 1034 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Pih1h3bQ8C6P5 218 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Lmbrd1Q8K0B2 537 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Mrpl11Q9CQF0 192 aaKnown RBP9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 CoasyQ9DBL7 563 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Pfkfb3A7UAK5 555 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 1700024B05RikE9Q6D7 167 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Birc5O70201 140 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 CraddO88843 199 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 PdgfaP20033 211 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Cbx2P30658 519 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Akr1b8P45377 316 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Nat1P50294 290 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ccna1Q61456 421 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Mcf2lQ64096 1149 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Prpf38bQ80SY5 542 aaKnown RBP9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Siglec10Q80ZE3 688 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Dusp19Q8K4T5 220 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Paip2bQ91W45 136 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Nmd3Q99L48 503 aaKnown RBP9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Dnaaf1Q9D2H9 634 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Mad2l2Q9D752 211 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Ccdc70Q9D9B0 223 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Wdr46Q9Z0H1 622 aaKnown RBP9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Gm9774A0A0A6YVU8 407 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Hnrnph3D3Z3N4 346 aaKnown RBP9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Pcdha4O88689 947 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Atf2P16951 487 aaKnown RBP9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Nr2f2P43135 414 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 XiapQ60989 496 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Parp6Q6P6P7 630 aa9.37□□□□□ -0.91
Col28a1-201ENSMUST00000115537 Wdr91Q7TMQ7 748 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms