RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 SvilQ8K4L3 2170 aa19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 Tssk1bQ61241 365 aa19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 Smarcal1Q8BJL0 910 aa19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 Epb41l5Q8BGS1 731 aa19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 CoasyQ9DBL7 563 aa19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 Fam71dD3YV92 440 aa19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 KitP05532 979 aa19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 P4hbP09103 509 aaKnown RBP19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 Mkl1Q8K4J6 964 aa19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 Serpina9Q9D7D2 418 aa19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 PygmQ9WUB3 842 aaKnown RBP19.3■□□□□ 0.68
Trim71-201ENSMUST00000111816 1700113H08RikE9Q9Q5 327 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Tcf3P15806 651 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 PorP37040 678 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Krt31Q61765 416 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Ubash3bQ8BGG7 638 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Smyd3Q9CWR2 428 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Gm5478D3Z6R0 159 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Vti1bO88384 232 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Calm4Q9JM83 148 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Tmem120aQ8C1E7 343 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Zbtb1Q91VL9 713 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Nrif2Q921B4 824 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Mad2l2Q9D752 211 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Gipc2Q9Z2H7 314 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Krt2Q3TTY5 707 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Xpo6Q924Z6 1125 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Kank3Q9Z1P7 791 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 6030498E09RikB1AX85 169 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Gm8237E9Q257 205 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Gm5849J3QPE5 117 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Mylk4Q5SUV5 386 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Sval3Q76I99 144 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Chmp1b1Q99LU0 199 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Peg12Q9WVA7 283 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Wdr49A0A0N4SUK7 710 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Mccc1Q99MR8 717 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Myh13B1AR69 1938 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Vbp1P61759 196 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Dnal1Q05A62 190 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Cpb2Q9JHH6 422 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Dctpp1Q9QY93 170 aa19.29■□□□□ 0.68
Trim71-201ENSMUST00000111816 Fsd1lQ8BYN5 507 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Prdm11A2AGX3 565 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Gm28042B7ZCM9 1014 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Gja6Q6S5G4 283 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 1700001J03RikQ80ZR8 219 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Arel1Q8CHG5 823 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Inpp5bQ8K337 993 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Slc2a5Q9WV38 501 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Tom1O88746 492 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Abcb1bP06795 1276 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Anks1bQ8BIZ1 1259 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Dbndd2Q9CRD4 158 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Mrto4Q9D0I8 239 aaKnown RBP19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Pprc1Q6NZN1 1644 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 McuQ3UMR5 350 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Ag2Q3UPL5 249 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Arhgef33Q8BW86 850 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Med15Q924H2 789 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 TrabdQ99JY4 376 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 MmadhcQ99LS1 296 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Cox16Q9CR63 106 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Fam45aQ9D8N2 357 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 GlyctkQ8QZY2 523 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Zcrb1Q9CZ96 217 aaKnown RBP19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Clca1Q9D7Z6 913 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Vav3Q9R0C8 847 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Kdm5cP41230 1554 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Gm5926E9PWJ8 236 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 S100a13P97352 98 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Papd5Q68ED3 633 aaKnown RBP19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Nmd3Q99L48 503 aaKnown RBP19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Polr3eQ9CZT4 710 aa19.28■□□□□ 0.68
Trim71-201ENSMUST00000111816 Vmn2r68L7N2B3 851 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Adcy1O88444 1118 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Sh3glb1Q9JK48 365 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Tbk1Q9WUN2 729 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Fbxw10Q5SUS0 1030 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Brpf3B2KF05 1204 aaKnown RBP19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Rps6P62754 249 aaKnown RBP19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Kdm7aQ3UWM4 940 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Pla2g4eQ50L42 875 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Dis3l2Q8CI75 870 aaKnown RBP19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Arl8aQ8VEH3 186 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Kbtbd12Q9D618 625 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 1700016D06RikQ9DAA5 166 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 H2bfmQ9DAB5 224 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Cse1lQ9ERK4 971 aaKnown RBP19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Vmn2r78K7N6U5 853 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Znf827Q505G8 1078 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Ifi47Q61635 420 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Atp8b4A2ANX3 1194 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Abcb5B5X0E4 1255 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Gm11027G8JL69 66 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Sox5P35710 763 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Cct8P42932 548 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Oog4Q4G0C7 502 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 Fhod1Q6P9Q4 1197 aa19.27■□□□□ 0.68
Trim71-201ENSMUST00000111816 MlphQ91V27 590 aa19.27■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms