RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Ttyh3Q6P5F7 524 aa19.61■□□□□ 0.73
Trim47-202ENSMUST00000106441 Ddx42Q810A7 929 aaKnown RBP19.61■□□□□ 0.73
Trim47-202ENSMUST00000106441 Epn2Q8CHU3 595 aa19.61■□□□□ 0.73
Trim47-202ENSMUST00000106441 Dennd1aQ8K382 1016 aa19.61■□□□□ 0.73
Trim47-202ENSMUST00000106441 Pdxdc1Q99K01 787 aaKnown RBP19.61■□□□□ 0.73
Trim47-202ENSMUST00000106441 Ccdc88cQ6VGS5 2009 aa19.61■□□□□ 0.73
Trim47-202ENSMUST00000106441 Fam171a1A2ATK9 892 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 SfnO70456 248 aaKnown RBP19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 CraddO88843 199 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 HelqQ2VPA6 1069 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Kctd16Q5DTY9 427 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Dph1Q5NCQ5 438 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Usp20Q8C6M1 916 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Dnm1lQ8K1M6 742 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Unc5bQ8K1S3 945 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Scgb2b20Q9JI02 112 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Serpinb6cW4VSP4 379 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Gm15262A0A140LIQ5 728 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Lrrc74aA0A1Y7VMD6 494 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Magea4F2Z493 315 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Pou2f2Q00196 463 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Kiaa1211Q5PR69 1207 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Depdc1bQ8BH88 529 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Nemp2Q8CB65 421 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Spdl1Q923A2 608 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Npm3Q9CPP0 175 aaKnown RBP19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Cfap53Q9D439 514 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Extl2Q9ES89 330 aa19.6■□□□□ 0.73
Trim47-202ENSMUST00000106441 Idh1O88844 414 aaKnown RBP19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 VimP20152 466 aaKnown RBP19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 GcP21614 476 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Fam207aP58468 219 aaKnown RBP19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Trappc3lQ4KL14 181 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Vav2Q60992 868 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Zbtb7bQ64321 544 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Dnajc8Q6NZB0 253 aaKnown RBP19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Tmem132dQ76HP3 1097 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Mrpl58Q8R035 206 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Vps36Q91XD6 386 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 PlekQ9JHK5 350 aaKnown RBP19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Cabp5Q9JLK3 173 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Syt5Q9R0N5 386 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Cntnap2Q9CPW0 1332 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Mmrn1B2RPV6 1210 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Gm8298J3QPI0 401 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Miga1Q4QQM5 600 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Grik5Q61626 979 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Cyp26b1Q811W2 512 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Ccdc65Q8VHI7 493 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Xpo6Q924Z6 1125 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Abcf2Q99LE6 628 aaKnown RBP19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Tlr9Q9EQU3 1032 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 BcamQ9R069 622 aa19.59■□□□□ 0.73
Trim47-202ENSMUST00000106441 Pgap3A2A559 320 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Tbc1d16A2ABG4 766 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gimap9G3X987 291 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 TxnP10639 105 aaKnown RBP19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Itgb7P26011 806 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Msh2P43247 935 aaKnown RBP19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Slc1a1P51906 523 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Tmem63bQ3TWI9 832 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Ttf2Q5NC05 1138 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Nop53Q8BK35 484 aaKnown RBP19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Trim32Q8CH72 655 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Fermt3Q8K1B8 665 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Pcdha5Q91Y15 934 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 Cep19Q9CQA8 163 aa19.58■□□□□ 0.72
Trim47-202ENSMUST00000106441 AfpP02772 605 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Epha3P29319 983 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Rnf113a2Q14B01 337 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 YdjcQ14BV6 310 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Gas7Q60780 421 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Ccdc25Q78PG9 208 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 HhatQ8BMT9 499 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 RalylQ8BTF8 293 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Aldh5a1Q8BWF0 523 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Lmo3Q8BZL8 145 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Lin9Q8C735 542 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Btbd7Q8CFE5 1130 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 H2-Q4Q8HWB2 354 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Ranbp17Q99NF8 1088 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Fam133bQ9CVI2 245 aaKnown RBP19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Serpina9Q9D7D2 418 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Slc15a2Q9ES07 729 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Zfp266E9Q2S7 604 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Vmn2r77L7N2B7 854 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Slc3a2P10852 526 aaKnown RBP19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Pon1P52430 355 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Ccdc92bQ5SUE3 299 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Elf1Q60775 612 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Slc9a9Q8BZ00 644 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Reep2Q8VCD6 254 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Ttc1Q91Z38 292 aa19.57■□□□□ 0.72
Trim47-202ENSMUST00000106441 Klhdc7aA2APT9 773 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Calb1P12658 261 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 ArP19091 899 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Erbb2P70424 1256 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Sox10Q04888 466 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 Cfap52Q5F201 620 aa19.56■□□□□ 0.72
Trim47-202ENSMUST00000106441 ItgaeQ60677 1167 aa19.56■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms