RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Srrm3Q80WV7 648 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tph2Q8CGV2 488 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Trpm8Q8R4D5 1104 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gm3404Q9D506 307 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Mrpl2Q9D773 306 aaKnown RBP10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rnf6Q9DBU5 667 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Orc3Q9JK30 715 aaKnown RBP10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Nudt5Q9JKX6 218 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tlr5Q9JLF7 859 aa10.37□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Scn11aQ9R053 1765 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Lrp5Q91VN0 1614 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gm4985A2ALC6 410 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Lrriq4A6H6A4 596 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 DffaO54786 331 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Aff1O88573 1216 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Hoxa11P31311 313 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gm5168Q4KL04 211 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 R3hdm4Q4VBF2 262 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cpa1Q7TPZ8 419 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ttc7aQ8BGB2 858 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Efl1Q8C0D5 1127 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 A430089I19RikQ8C9W1 407 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 NemfQ8CCP0 1064 aaKnown RBP10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ppp1r16bQ8VHQ3 568 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pls3Q99K51 630 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Fgfr1op2Q9CRA9 253 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 CactinQ9CS00 772 aaKnown RBP10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 GrapQ9CX99 217 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Styxl1Q9DAR2 321 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Vav3Q9R0C8 847 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Extl3Q9WVL6 918 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 UncxO08934 530 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cdk14O35495 469 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Eif3dO70194 548 aaKnown RBP10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gja8P28236 440 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 RalaP63321 206 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 NfibP97863 570 aaKnown RBP10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ect2Q07139 913 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gbp8Q2V6D6 525 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Klrg2Q3UM83 387 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 GmncQ3URY2 333 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Slc17a8Q8BFU8 601 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pnma1Q8C1C8 353 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Epn2Q8CHU3 595 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Znf467Q8JZL0 594 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Abcf3Q8K268 709 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 MgarpQ8VI64 283 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Krt20Q9D312 431 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pard6bQ9JK83 371 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gbp2Q9Z0E6 589 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Myh10Q61879 1976 aaKnown RBP10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Heatr4E9Q357 955 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Slc3a2P10852 526 aaKnown RBP10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Pik3r1P26450 724 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rcn1Q05186 325 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Dnm1lQ8K1M6 742 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Unc5bQ8K1S3 945 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ces1fQ91WU0 561 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Q91Z58 1206 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Igf2bp3Q9CPN8 579 aaKnown RBP10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 SarnpQ9D1J3 210 aaKnown RBP10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 IkbipQ9DBZ1 373 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ggt5Q9Z2A9 573 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cacna1sQ02789 1880 aa10.36□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 AfmO89020 608 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 MyrflQ3UN70 904 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Ccdc110Q3V125 848 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 GmipQ6PGG2 971 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Tmc3Q7TQ69 1130 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Heatr3Q8BQM4 679 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gmcl1Q920G9 524 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Caln1Q9JJG7 219 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 ErmapQ9JLN5 566 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Phtf1Q9QZ09 761 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gimd1E9PW74 217 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gm4841E9QAA8 417 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 S100bP50114 92 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 YwhagP61982 247 aaKnown RBP10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Znf367Q0VDT2 340 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Sema5aQ62217 1077 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gm2163Q6PCY5 473 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Stoml1Q8CI66 399 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Mmrn2A6H6E2 943 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Sept7O55131 436 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 HpdP49429 393 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Atp13a5Q3TYU2 1216 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 FancbQ5XJY6 703 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 C2cd5Q7TPS5 1016 aaKnown RBP10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Il17cQ8K4C5 194 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Scrn2Q8VCA8 425 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Cttnbp2nlQ99LJ0 638 aa10.35□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Slc27a2O35488 620 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 FechP22315 420 aaKnown RBP10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Rab20P35295 233 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 CtshP49935 333 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Creb1Q01147 341 aaKnown RBP10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 GscQ02591 256 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Gpr162Q3UN16 588 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Fam92bQ3V2J0 292 aa10.34□□□□□ -0.75
Pcdh1-201ENSMUST00000057185 Klra4Q60651 263 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms