RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Sec14l2Q99J08 403 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Golga1Q9CW79 758 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Wdr83Q9DAJ4 315 aaKnown RBP16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Ecel1Q9JMI0 775 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Mpp2Q9WV34 552 aa16.02■□□□□ 0.16
Nup54-201ENSMUST00000038514 Lrrc10bG3XA50 292 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Pitpnm1O35954 1243 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Ctnnal1O88327 731 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Aff1O88573 1216 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Lrrn4P59383 733 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Palb2Q3U0P1 1104 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Brd9Q3UQU0 596 aaKnown RBP16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Klra3Q64329 266 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Pla2g4cQ64GA5 597 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Fnbp4Q6ZQ03 1031 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Q80WR5 230 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 AsphQ8BSY0 741 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Pop1Q8K205 1045 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Ero1aQ8R180 464 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Tgm5Q9D7I9 724 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Gtf3c6Q9D8P7 227 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Rnf6Q9DBU5 667 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Extl3Q9WVL6 918 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Btaf1E9QAE3 1848 aa16.02■□□□□ 0.15
Nup54-201ENSMUST00000038514 Mmrn2A6H6E2 943 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Snx3O70492 162 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 LdhbP16125 334 aaKnown RBP16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 PtpreP49446 699 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Adcy7P51829 1099 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Gtf2bP62915 316 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Aars2Q14CH7 980 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Large2Q5XPT3 690 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 SkiQ60698 725 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Sema5aQ62217 1077 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Phc1Q64028 1012 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Ddx31Q6NZQ2 687 aaKnown RBP16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 MogsQ80UM7 834 aaKnown RBP16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Sap130Q8BIH0 1057 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Hectd2Q8CDU6 774 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 CalcbQ99MP3 130 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Igf2bp3Q9CPN8 579 aaKnown RBP16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 IqcdQ9D3V1 458 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Prss23Q9D6X6 382 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Cnot8Q9D8X5 292 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Tex13c2A0A0G2JGA3 530 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Slc6a16A0A1L1SR47 742 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Gm3182K7N6T8 263 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Ifnb1P01575 182 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Dab2ipQ3UHC7 1189 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Gbp4Q61107 620 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Nlrp4fQ66X05 959 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 PicalmQ7M6Y3 660 aaKnown RBP16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Kbtbd3Q8BHI4 607 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Zfp120Q8BZW4 436 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Inpp5fQ8CDA1 1132 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Vmn1r64Q8R2B8 320 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Mettl16Q9CQG2 553 aaKnown RBP16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Sppl3Q9CUS9 384 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Rbm31yQ9D3U4 565 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 IdeQ9JHR7 1019 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 ErmapQ9JLN5 566 aa16.01■□□□□ 0.15
Nup54-201ENSMUST00000038514 Zfp839E9PUU5 921 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Dnajb6O54946 365 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Ccnd2P30280 289 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Cops2P61202 443 aaKnown RBP16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Lmntd2Q0VET5 664 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Zcwpw1Q6IR42 630 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 SnphQ80U23 495 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Ddx42Q810A7 929 aaKnown RBP16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Cyp2d26Q8CIM7 500 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Mfsd5Q921Y4 450 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Fgfr1op2Q9CRA9 253 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Snf8Q9CZ28 258 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Spc24Q9D083 201 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 SufuQ9Z0P7 484 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Spata31d1aE9QA35 1336 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Gm15262A0A140LIQ5 728 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Znf804aA2AKY4 1200 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Zfp212G3X8R7 492 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Rgsl1H3BL40 1073 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Dhx15O35286 795 aaKnown RBP16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Ccdc138Q0VF22 680 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Sfi1Q3UZY0 1216 aaKnown RBP16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Xpnpep1Q6P1B1 623 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Ubap1Q8BH48 502 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Rsad2Q8CBB9 362 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 NptxrQ99J85 493 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Tmed5Q9CXE7 229 aa16■□□□□ 0.15
Nup54-201ENSMUST00000038514 Olfr552E9Q545 317 aa15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 AdssP46664 456 aa15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 Odr4Q4PJX1 447 aa15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 Hook3Q8BUK6 718 aa15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 Shtn1Q8K2Q9 631 aa15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 Med15Q924H2 789 aa15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 Ggt5Q9Z2A9 573 aa15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 Cntnap5cQ0V8T7 1305 aa15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 Alkbh1P0CB42 389 aa15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 CalrP14211 416 aaKnown RBP15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 Atf2P16951 487 aaKnown RBP15.99■□□□□ 0.15
Nup54-201ENSMUST00000038514 Tph1P17532 447 aa15.99■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms