RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Xbp1O35426 267 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Agbl1Q09M05 972 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Q3UJP5 209 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm4952Q5FW57 296 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tspyl5Q69ZB3 406 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ubxn6Q99PL6 442 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 RpainQ9CWY9 219 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Snf8Q9CZ28 258 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ltn1Q6A009 1767 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Per2O54943 1257 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 PrkcbP68404 671 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 SkiQ60698 725 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gpd2Q64521 727 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Nudt16Q6P3D0 195 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Daam1Q8BPM0 1077 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 MslnlQ8C160 685 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ccdc186Q8C9S4 917 aa9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ddx47Q9CWX9 455 aaKnown RBP9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ccdc124Q9D8X2 217 aaKnown RBP9.04□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm5926E9PWJ8 236 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Speer4f2E9Q366 295 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 PtenO08586 403 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Caprin2Q05A80 1031 aaKnown RBP9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cul4aQ3TCH7 759 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gigyf2Q6Y7W8 1291 aaKnown RBP9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Adcy2Q80TL1 1090 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm5622Q810Q0 167 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Slc7a14Q8BXR1 771 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 PrameQ9D4Z5 464 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Fgfr2P21803 821 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cav1P49817 178 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Hsd17b1P51656 344 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Zscan2Q07230 614 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Dhx32Q8BZS9 744 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ttc22Q8C159 568 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gpc5Q8CAL5 572 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Znf467Q8JZL0 594 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 St13Q99L47 371 aaKnown RBP9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Golph3Q9CRA5 298 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Orc3Q9JK30 715 aaKnown RBP9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm6657A0A1B0GRJ3 277 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Epb41l4aP52963 686 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Asprv1Q09PK2 339 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ndufaf2Q59J78 168 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Birc2Q62210 612 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ssx2ipQ8VC66 615 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mis12Q9CY25 206 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Satl1Q9D5N8 744 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Olig1Q9JKN5 260 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Akt3Q9WUA6 479 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rasgrp1Q9Z1S3 795 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 2210011C24RikA0A087WQ89 206 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mdm4O35618 489 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Acbd3Q8BMP6 525 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Unc5bQ8K1S3 945 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Wrap53Q8VC51 532 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Aipl1Q924K1 328 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Dhx58Q99J87 678 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rpa3Q9CQ71 121 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Dnajc12Q9R022 198 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cyp2c68K7N6C2 491 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Vps41Q5KU39 853 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Lilrb4Q64281 335 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ssxb10Q6XAR7 170 aa9.03□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Hsf3D0VYS2 492 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Syt2P46097 422 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Map3k7clP58500 142 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ppp1r1bQ60829 194 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Slc9b1Q8C0X2 565 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tph2Q8CGV2 488 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Eif3hQ91WK2 352 aaKnown RBP9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Psmd6Q99JI4 389 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Polr3eQ9CZT4 710 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ngly1Q9JI78 651 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Sv2aQ9JIS5 742 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Usp21Q9QZL6 566 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Kcnd2Q9Z0V2 630 aa9.02□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ccdc6D3YZP9 469 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Pdzrn4E9PUZ9 1014 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Clcn6O35454 870 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Etv6P97360 485 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 GabpaQ00422 454 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Zfp91Q62511 572 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cacna2d2Q6PHS9 1154 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ush1gQ80T11 461 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Llgl1Q80Y17 1036 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Wdr35Q8BND3 1181 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Cabs1Q8C633 391 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mill1Q8HWE7 395 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Znf445Q8R2V3 986 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 CtsqQ91ZF4 343 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Rnaseh2aQ9CWY8 301 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ddx56Q9D0R4 546 aaKnown RBP9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Mzb1Q9D8I1 188 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 1700017N19RikA0A087WPJ1 469 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Scgb2b7D3YYY1 112 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Trove2O08848 538 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Ppp3caP63328 521 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Insm1Q63ZV0 521 aa9.02□□□□□ -0.97
Sf3b1-201ENSMUST00000027127 Nuak1Q641K5 658 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms