RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Slc15a2Q9ES07 729 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Cnga3Q9JJZ8 631 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Klrc2Q9WTJ9 238 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 RptorQ8K4Q0 1335 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Serpinb6eI7HJI3 429 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Bace1P56818 501 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Gpd2Q64521 727 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Zcchc2Q69ZB8 1166 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Calhm6Q8C9E8 313 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Znf830Q8R1N0 363 aaKnown RBP17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Serpina9Q9D7D2 418 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Ccdc91Q9D8L5 442 aa17.57■□□□□ 0.4
Shh-201ENSMUST00000002708 Rasal2E9PW37 1286 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 PrphP15331 475 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Fgfr2P21803 821 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Marcksl1P28667 200 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Syt2P46097 422 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Hoxc13P50207 328 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Ephb2P54763 986 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Edem3Q2HXL6 931 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Ctnna2Q61301 953 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Six1Q62231 284 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Zswim5Q80TC6 1188 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Tor1aip2Q8BYU6 502 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Slc9a9Q8BZ00 644 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Xab2Q9DCD2 855 aaKnown RBP17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Tspoap1Q7TNF8 1846 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Syngap1F6SEU4 1340 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Patl2A2ARM1 529 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 TazI7HJS2 263 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Zfy1P10925 782 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Krt8P11679 490 aaKnown RBP17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 ThbdP15306 577 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 AdssP46664 456 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 PctpP53808 214 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Gtf2bP62915 316 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Col9a2Q07643 688 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Fdxacb1Q3UY23 622 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Cyp2c67Q569X9 491 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Inpp4bQ6P1Y8 924 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Ece2Q80Z60 881 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Pnma1Q8C1C8 353 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Usp29Q9ES63 869 aa17.56■□□□□ 0.4
Shh-201ENSMUST00000002708 Casq2O09161 415 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Art2bO35975 289 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Ccnd2P30280 289 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 RcvrnP34057 202 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Casp4P70343 373 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Tmem120bQ3TA38 339 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Wdr41Q3UDP0 460 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Skap1Q3UUV5 355 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Dnajc8Q6NZB0 253 aaKnown RBP17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 GmipQ6PGG2 971 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Pih1h3bQ8C6P5 218 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Commd10Q8JZY2 202 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Cplx3Q8R1B5 158 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Cpa5Q8R4H4 436 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Usp33Q8R5K2 909 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Med15Q924H2 789 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 HgsQ99LI8 775 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Rnf225Q9D7D1 332 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Uhmk1P97343 419 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 rp9P97762 213 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 CcnjlQ5SRT8 387 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 AlcamQ61490 583 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Kctd6Q8BNL5 237 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Rtp1Q8C8C1 263 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Chordc1Q9D1P4 331 aaKnown RBP17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Mipol1Q9D9F8 279 aa17.55■□□□□ 0.4
Shh-201ENSMUST00000002708 Vmn2r63E9Q0K5 859 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Gm9268E9Q0M3 861 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Vmn2r62K7N712 859 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Smarcad1Q04692 1021 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Znf652Q5DU09 608 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 SpdyaQ5IBH7 310 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Tbc1d22bQ80VE5 505 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Nipa1Q8BHK1 323 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Tarsl2Q8BLY2 790 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Rassf9Q8K342 435 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Gpatch1Q9DBM1 930 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Tcirg1Q9JHF5 834 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Adam22Q9R1V6 904 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Nup62clA2AG10 272 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Myo1eE9Q634 1107 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Gm10436L7N1Y3 520 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Krt19P19001 403 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Rab21P35282 222 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Phactr1Q2M3X8 580 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Trim80Q3V061 624 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Mtus1Q5HZI1 1210 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Fmnl3Q6ZPF4 1028 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 LdhdQ7TNG8 484 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 TbckQ8BM85 762 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Btbd6Q8K2J9 488 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Slc12a8Q8VI23 705 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Sppl3Q9CUS9 384 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Phf2Q9WTU0 1096 aa17.54■□□□□ 0.4
Shh-201ENSMUST00000002708 Ccdc152E9PX14 254 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Cap1P40124 474 aa17.53■□□□□ 0.4
Shh-201ENSMUST00000002708 Psmc5P62196 406 aa17.53■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms