RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C POF1P25576 258 aa2.27□□□□□ -2.05
CUP9YPL177C YER188WP40103 239 aa2.27□□□□□ -2.05
CUP9YPL177C SER33P40510 469 aa2.27□□□□□ -2.05
CUP9YPL177C RPE1P46969 238 aa2.27□□□□□ -2.05
CUP9YPL177C YPL039WQ03080 316 aa2.27□□□□□ -2.05
CUP9YPL177C SFH1Q06168 426 aa2.27□□□□□ -2.05
CUP9YPL177C CLP1Q08685 445 aaPredicted RBP2.27□□□□□ -2.05
CUP9YPL177C FEX1Q08913 375 aa2.27□□□□□ -2.05
CUP9YPL177C FEX2Q08991 375 aa2.27□□□□□ -2.05
CUP9YPL177C TIM22Q12328 207 aa2.27□□□□□ -2.05
CUP9YPL177C RPP0P05317 312 aaKnown RBP2.26□□□□□ -2.05
CUP9YPL177C SSA3P09435 649 aaKnown RBP2.26□□□□□ -2.05
CUP9YPL177C ERG2P32352 222 aa2.26□□□□□ -2.05
CUP9YPL177C MRX5P47007 382 aa2.26□□□□□ -2.05
CUP9YPL177C GPI8P49018 411 aa2.26□□□□□ -2.05
CUP9YPL177C RSM27P53305 110 aa2.26□□□□□ -2.05
CUP9YPL177C SDC1Q03323 175 aa2.26□□□□□ -2.05
CUP9YPL177C MIX17Q03667 156 aa2.26□□□□□ -2.05
CUP9YPL177C ARV1Q06541 321 aa2.26□□□□□ -2.05
CUP9YPL177C SPL2P38839 148 aa2.25□□□□□ -2.05
CUP9YPL177C SUR2P38992 349 aa2.25□□□□□ -2.05
CUP9YPL177C YNL095CP53932 642 aa2.25□□□□□ -2.05
CUP9YPL177C YMR166CQ03829 368 aa2.25□□□□□ -2.05
CUP9YPL177C SEC10Q06245 871 aa2.25□□□□□ -2.05
CUP9YPL177C YOL019WQ08157 551 aa2.25□□□□□ -2.05
CUP9YPL177C YPL150WQ12152 901 aa2.25□□□□□ -2.05
CUP9YPL177C YAL064W-BO13512 126 aa2.24□□□□□ -2.05
CUP9YPL177C HIS3P06633 220 aa2.24□□□□□ -2.05
CUP9YPL177C OM45P16547 393 aa2.24□□□□□ -2.05
CUP9YPL177C RSA4P25382 515 aaKnown RBP2.24□□□□□ -2.05
CUP9YPL177C CAM1P29547 415 aaKnown RBP2.24□□□□□ -2.05
CUP9YPL177C YKR032WP36127 104 aa2.24□□□□□ -2.05
CUP9YPL177C ARN2P38724 620 aa2.24□□□□□ -2.05
CUP9YPL177C PIR5P46999 287 aa2.24□□□□□ -2.05
CUP9YPL177C OST3P48439 350 aa2.24□□□□□ -2.05
CUP9YPL177C TRM44Q02648 567 aaKnown RBP2.24□□□□□ -2.05
CUP9YPL177C PER33Q12144 273 aa2.24□□□□□ -2.05
CUP9YPL177C YBL112CQ3E7Y4 105 aa2.24□□□□□ -2.05
CUP9YPL177C NUP157P40064 1391 aaKnown RBP2.23□□□□□ -2.05
CUP9YPL177C ZWF1P11412 505 aaKnown RBP2.23□□□□□ -2.05
CUP9YPL177C UTR5P32630 166 aa2.23□□□□□ -2.05
CUP9YPL177C CAB3P36076 571 aa2.23□□□□□ -2.05
CUP9YPL177C MRPL37P36532 105 aa2.23□□□□□ -2.05
CUP9YPL177C HMT1P38074 348 aa2.23□□□□□ -2.05
CUP9YPL177C HSM3P38348 480 aa2.23□□□□□ -2.05
CUP9YPL177C RTT105P40063 208 aa2.23□□□□□ -2.05
CUP9YPL177C COA1P40452 197 aa2.23□□□□□ -2.05
CUP9YPL177C YOS9Q99220 542 aa2.23□□□□□ -2.05
CUP9YPL177C MET16P18408 261 aaPredicted RBP2.22□□□□□ -2.05
CUP9YPL177C PEX3P28795 441 aa2.22□□□□□ -2.05
CUP9YPL177C CSG2P35206 410 aa2.22□□□□□ -2.05
CUP9YPL177C MED6P38782 295 aa2.22□□□□□ -2.05
CUP9YPL177C EMC2P47133 292 aaKnown RBP2.22□□□□□ -2.05
CUP9YPL177C SYF2P53277 215 aaPredicted RBP2.22□□□□□ -2.05
CUP9YPL177C SWS2P53937 143 aa2.22□□□□□ -2.05
CUP9YPL177C FCF1Q05498 189 aaPredicted RBP2.22□□□□□ -2.05
CUP9YPL177C GMC2Q06201 188 aa2.22□□□□□ -2.05
CUP9YPL177C AI5_BETAQ9ZZX0 354 aa2.22□□□□□ -2.05
CUP9YPL177C SSK22P25390 1331 aaPredicted RBP2.21□□□□□ -2.06
CUP9YPL177C YEL009C-AA0A023PZF2 135 aa2.21□□□□□ -2.06
CUP9YPL177C RPL4AP10664 362 aaKnown RBP2.21□□□□□ -2.06
CUP9YPL177C RCY1P39531 840 aa2.21□□□□□ -2.06
CUP9YPL177C MEP1P40260 492 aa2.21□□□□□ -2.06
CUP9YPL177C YJL118WP47022 219 aa2.21□□□□□ -2.06
CUP9YPL177C RPL4BP49626 362 aaKnown RBP2.21□□□□□ -2.06
CUP9YPL177C NBP35P52920 328 aa2.21□□□□□ -2.06
CUP9YPL177C SSU72P53538 206 aaPredicted RBP2.21□□□□□ -2.06
CUP9YPL177C MNT4P53745 580 aa2.21□□□□□ -2.06
CUP9YPL177C CTR3Q06686 241 aa2.21□□□□□ -2.06
CUP9YPL177C AGC1Q12482 902 aa2.21□□□□□ -2.06
CUP9YPL177C COS2P0CX12 379 aa2.2□□□□□ -2.06
CUP9YPL177C COS3P0CX13 379 aa2.2□□□□□ -2.06
CUP9YPL177C TOM40P23644 387 aaKnown RBP2.2□□□□□ -2.06
CUP9YPL177C RIB7P33312 244 aa2.2□□□□□ -2.06
CUP9YPL177C COY1P34237 679 aa2.2□□□□□ -2.06
CUP9YPL177C EBP2P36049 427 aaKnown RBP2.2□□□□□ -2.06
CUP9YPL177C HEK2P38199 381 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CUP9YPL177C YHL049CP38722 271 aa2.2□□□□□ -2.06
CUP9YPL177C SCC4P40090 624 aa2.2□□□□□ -2.06
CUP9YPL177C TAD2P47058 250 aa2.2□□□□□ -2.06
CUP9YPL177C TIM21P53220 239 aa2.2□□□□□ -2.06
CUP9YPL177C OST6Q03723 332 aa2.2□□□□□ -2.06
CUP9YPL177C ISD11Q6Q560 94 aa2.2□□□□□ -2.06
CUP9YPL177C NPT1P39683 429 aaKnown RBP2.19□□□□□ -2.06
CUP9YPL177C NBP1P52919 319 aaPredicted RBP2.19□□□□□ -2.06
CUP9YPL177C KAP114P53067 1004 aa2.19□□□□□ -2.06
CUP9YPL177C ATC1Q04005 294 aa2.19□□□□□ -2.06
CUP9YPL177C CTS2Q06350 511 aa2.19□□□□□ -2.06
CUP9YPL177C RAD10P06838 210 aa2.18□□□□□ -2.06
CUP9YPL177C YHI9P38765 294 aa2.18□□□□□ -2.06
CUP9YPL177C NIF3P53081 288 aa2.18□□□□□ -2.06
CUP9YPL177C COX20Q04935 205 aa2.18□□□□□ -2.06
CUP9YPL177C RDS3Q06835 107 aaPredicted RBP2.18□□□□□ -2.06
CUP9YPL177C RRP36Q12481 300 aaPredicted RBP2.18□□□□□ -2.06
CUP9YPL177C COX2P00410 251 aa2.17□□□□□ -2.06
CUP9YPL177C HIS1P00498 297 aaKnown RBP2.17□□□□□ -2.06
CUP9YPL177C RRT12P25381 491 aa2.17□□□□□ -2.06
CUP9YPL177C SHC1P39000 512 aa2.17□□□□□ -2.06
CUP9YPL177C YJL028WP47062 111 aa2.17□□□□□ -2.06
CUP9YPL177C MAL13P53338 473 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms