RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W TVP15Q03860 143 aa2.96□□□□□ -1.94
SPO20YMR017W SFH1Q06168 426 aa2.96□□□□□ -1.94
SPO20YMR017W LOA1Q06508 300 aa2.96□□□□□ -1.94
SPO20YMR017W PEX3P28795 441 aa2.95□□□□□ -1.94
SPO20YMR017W ERG2P32352 222 aa2.95□□□□□ -1.94
SPO20YMR017W YER084WP40057 128 aa2.95□□□□□ -1.94
SPO20YMR017W FMP41P53889 259 aaKnown RBP2.95□□□□□ -1.94
SPO20YMR017W FEX1Q08913 375 aa2.95□□□□□ -1.94
SPO20YMR017W FEX2Q08991 375 aa2.95□□□□□ -1.94
SPO20YMR017W SSK22P25390 1331 aaPredicted RBP2.94□□□□□ -1.94
SPO20YMR017W YAL064W-BO13512 126 aa2.94□□□□□ -1.94
SPO20YMR017W KRE1P17260 313 aa2.94□□□□□ -1.94
SPO20YMR017W CAM1P29547 415 aaKnown RBP2.94□□□□□ -1.94
SPO20YMR017W RTT105P40063 208 aa2.94□□□□□ -1.94
SPO20YMR017W CDC14Q00684 551 aa2.94□□□□□ -1.94
SPO20YMR017W SDC1Q03323 175 aa2.94□□□□□ -1.94
SPO20YMR017W SEC10Q06245 871 aa2.94□□□□□ -1.94
SPO20YMR017W NUP157P40064 1391 aaKnown RBP2.93□□□□□ -1.94
SPO20YMR017W ZWF1P11412 505 aaKnown RBP2.93□□□□□ -1.94
SPO20YMR017W POF1P25576 258 aa2.93□□□□□ -1.94
SPO20YMR017W RCY1P39531 840 aa2.93□□□□□ -1.94
SPO20YMR017W SER33P40510 469 aa2.93□□□□□ -1.94
SPO20YMR017W EMC2P47133 292 aaKnown RBP2.93□□□□□ -1.94
SPO20YMR017W GMC2Q06201 188 aa2.93□□□□□ -1.94
SPO20YMR017W ARV1Q06541 321 aa2.93□□□□□ -1.94
SPO20YMR017W PER33Q12144 273 aa2.93□□□□□ -1.94
SPO20YMR017W YOS9Q99220 542 aa2.93□□□□□ -1.94
SPO20YMR017W RPP0P05317 312 aaKnown RBP2.92□□□□□ -1.94
SPO20YMR017W OM45P16547 393 aa2.92□□□□□ -1.94
SPO20YMR017W SPL2P38839 148 aa2.92□□□□□ -1.94
SPO20YMR017W IGO1P53897 168 aa2.92□□□□□ -1.94
SPO20YMR017W YNL095CP53932 642 aa2.92□□□□□ -1.94
SPO20YMR017W YPL039WQ03080 316 aa2.92□□□□□ -1.94
SPO20YMR017W YPL150WQ12152 901 aa2.92□□□□□ -1.94
SPO20YMR017W TIM22Q12328 207 aa2.92□□□□□ -1.94
SPO20YMR017W MET16P18408 261 aaPredicted RBP2.91□□□□□ -1.94
SPO20YMR017W RSA4P25382 515 aaKnown RBP2.91□□□□□ -1.94
SPO20YMR017W ARN2P38724 620 aa2.91□□□□□ -1.94
SPO20YMR017W YHI9P38765 294 aa2.91□□□□□ -1.94
SPO20YMR017W SUR2P38992 349 aa2.91□□□□□ -1.94
SPO20YMR017W COA1P40452 197 aa2.91□□□□□ -1.94
SPO20YMR017W CAB3P36076 571 aa2.9□□□□□ -1.95
SPO20YMR017W YKR032WP36127 104 aa2.9□□□□□ -1.95
SPO20YMR017W MRPL37P36532 105 aa2.9□□□□□ -1.95
SPO20YMR017W HSM3P38348 480 aa2.9□□□□□ -1.95
SPO20YMR017W SHC1P39000 512 aa2.9□□□□□ -1.95
SPO20YMR017W MEP1P40260 492 aa2.9□□□□□ -1.95
SPO20YMR017W TAD2P47058 250 aa2.9□□□□□ -1.95
SPO20YMR017W OST3P48439 350 aa2.9□□□□□ -1.95
SPO20YMR017W KAP114P53067 1004 aa2.9□□□□□ -1.95
SPO20YMR017W TIM21P53220 239 aa2.9□□□□□ -1.95
SPO20YMR017W CLP1Q08685 445 aaPredicted RBP2.9□□□□□ -1.95
SPO20YMR017W HIS3P06633 220 aa2.89□□□□□ -1.95
SPO20YMR017W RIB7P33312 244 aa2.89□□□□□ -1.95
SPO20YMR017W CSG2P35206 410 aa2.89□□□□□ -1.95
SPO20YMR017W HMT1P38074 348 aa2.89□□□□□ -1.95
SPO20YMR017W NPT1P39683 429 aaKnown RBP2.89□□□□□ -1.95
SPO20YMR017W MNT4P53745 580 aa2.89□□□□□ -1.95
SPO20YMR017W YMR166CQ03829 368 aa2.89□□□□□ -1.95
SPO20YMR017W CTR3Q06686 241 aa2.89□□□□□ -1.95
SPO20YMR017W YOL019WQ08157 551 aa2.89□□□□□ -1.95
SPO20YMR017W ISD11Q6Q560 94 aa2.89□□□□□ -1.95
SPO20YMR017W AI5_BETAQ9ZZX0 354 aa2.89□□□□□ -1.95
SPO20YMR017W STH1P32597 1359 aa2.88□□□□□ -1.95
SPO20YMR017W YEL009C-AA0A023PZF2 135 aa2.88□□□□□ -1.95
SPO20YMR017W RPL24AP04449 155 aaKnown RBP2.88□□□□□ -1.95
SPO20YMR017W BMH1P29311 267 aaKnown RBP2.88□□□□□ -1.95
SPO20YMR017W UTR5P32630 166 aa2.88□□□□□ -1.95
SPO20YMR017W SYF2P53277 215 aaPredicted RBP2.88□□□□□ -1.95
SPO20YMR017W SWS2P53937 143 aa2.88□□□□□ -1.95
SPO20YMR017W MIX17Q03667 156 aa2.88□□□□□ -1.95
SPO20YMR017W YBL112CQ3E7Y4 105 aa2.88□□□□□ -1.95
SPO20YMR017W RPL4AP10664 362 aaKnown RBP2.87□□□□□ -1.95
SPO20YMR017W PET100P38958 111 aa2.87□□□□□ -1.95
SPO20YMR017W DDI1P40087 428 aa2.87□□□□□ -1.95
SPO20YMR017W SCC4P40090 624 aa2.87□□□□□ -1.95
SPO20YMR017W RPL4BP49626 362 aaKnown RBP2.87□□□□□ -1.95
SPO20YMR017W NBP35P52920 328 aa2.87□□□□□ -1.95
SPO20YMR017W COX20Q04935 205 aa2.87□□□□□ -1.95
SPO20YMR017W FCF1Q05498 189 aaPredicted RBP2.87□□□□□ -1.95
SPO20YMR017W RRP36Q12481 300 aaPredicted RBP2.87□□□□□ -1.95
SPO20YMR017W HEK2P38199 381 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
SPO20YMR017W YER188WP40103 239 aa2.86□□□□□ -1.95
SPO20YMR017W PIR5P46999 287 aa2.86□□□□□ -1.95
SPO20YMR017W OST6Q03723 332 aa2.86□□□□□ -1.95
SPO20YMR017W SME1Q12330 94 aaPredicted RBP2.86□□□□□ -1.95
SPO20YMR017W AGC1Q12482 902 aa2.86□□□□□ -1.95
SPO20YMR017W COX2P00410 251 aa2.85□□□□□ -1.95
SPO20YMR017W HIS1P00498 297 aaKnown RBP2.85□□□□□ -1.95
SPO20YMR017W COS2P0CX12 379 aa2.85□□□□□ -1.95
SPO20YMR017W COS3P0CX13 379 aa2.85□□□□□ -1.95
SPO20YMR017W SSU72P53538 206 aaPredicted RBP2.85□□□□□ -1.95
SPO20YMR017W MPP6P53725 186 aaPredicted RBP2.85□□□□□ -1.95
SPO20YMR017W ATC1Q04005 294 aa2.85□□□□□ -1.95
SPO20YMR017W TOM40P23644 387 aaKnown RBP2.84□□□□□ -1.95
SPO20YMR017W RRT12P25381 491 aa2.84□□□□□ -1.95
SPO20YMR017W YHL049CP38722 271 aa2.84□□□□□ -1.95
SPO20YMR017W YJL118WP47022 219 aa2.84□□□□□ -1.95
SPO20YMR017W SLX9P53251 210 aaPredicted RBP2.84□□□□□ -1.95
SPO20YMR017W COY1P34237 679 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms