RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W YLR108CQ12259 485 aa4.34□□□□□ -1.71
LDB18YLL049W PDE2P06776 526 aa4.33□□□□□ -1.72
LDB18YLL049W YCR100CP25606 316 aa4.33□□□□□ -1.72
LDB18YLL049W MIG1P27705 504 aa4.33□□□□□ -1.72
LDB18YLL049W PPA2P28239 310 aa4.33□□□□□ -1.72
LDB18YLL049W PUP2P32379 260 aa4.33□□□□□ -1.72
LDB18YLL049W YKL071WP36086 256 aa4.33□□□□□ -1.72
LDB18YLL049W APL3P38065 1025 aa4.33□□□□□ -1.72
LDB18YLL049W ALP1P38971 573 aa4.33□□□□□ -1.72
LDB18YLL049W PFS2P42841 465 aaKnown RBP4.33□□□□□ -1.72
LDB18YLL049W YGR201CP42936 225 aa4.33□□□□□ -1.72
LDB18YLL049W IRC7P43623 340 aa4.33□□□□□ -1.72
LDB18YLL049W IMD4P50094 524 aaKnown RBP4.33□□□□□ -1.72
LDB18YLL049W YNR062CP53748 327 aa4.33□□□□□ -1.72
LDB18YLL049W HRT1Q08273 121 aa4.33□□□□□ -1.72
LDB18YLL049W USB1Q12208 290 aaKnown RBP4.33□□□□□ -1.72
LDB18YLL049W MET3P08536 511 aa4.32□□□□□ -1.72
LDB18YLL049W YMR085WP0CF18 432 aa4.32□□□□□ -1.72
LDB18YLL049W YOL163WP0CF20 169 aa4.32□□□□□ -1.72
LDB18YLL049W ACH1P32316 526 aa4.32□□□□□ -1.72
LDB18YLL049W IES6P32617 166 aa4.32□□□□□ -1.72
LDB18YLL049W PAD1P33751 242 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
LDB18YLL049W FLX1P40464 311 aa4.32□□□□□ -1.72
LDB18YLL049W NAS2P40555 220 aa4.32□□□□□ -1.72
LDB18YLL049W PMT6P42934 759 aa4.32□□□□□ -1.72
LDB18YLL049W MRM2P53123 320 aa4.32□□□□□ -1.72
LDB18YLL049W MTL1P53214 551 aa4.32□□□□□ -1.72
LDB18YLL049W MRPL22P53881 309 aa4.32□□□□□ -1.72
LDB18YLL049W APM1Q00776 475 aaPredicted RBP4.32□□□□□ -1.72
LDB18YLL049W SNO4Q04902 237 aa4.32□□□□□ -1.72
LDB18YLL049W YLR224WQ05947 369 aa4.32□□□□□ -1.72
LDB18YLL049W ARO10Q06408 635 aa4.32□□□□□ -1.72
LDB18YLL049W MFG1Q07684 458 aa4.32□□□□□ -1.72
LDB18YLL049W HSP33Q08914 237 aaKnown RBP4.32□□□□□ -1.72
LDB18YLL049W HSP32Q08992 237 aa4.32□□□□□ -1.72
LDB18YLL049W SIA1Q12212 622 aa4.32□□□□□ -1.72
LDB18YLL049W RAD52P06778 471 aaKnown RBP4.31□□□□□ -1.72
LDB18YLL049W CCA1P21269 546 aa4.31□□□□□ -1.72
LDB18YLL049W VPH2P32341 215 aa4.31□□□□□ -1.72
LDB18YLL049W SSE2P32590 693 aaKnown RBP4.31□□□□□ -1.72
LDB18YLL049W CUE1P38428 203 aa4.31□□□□□ -1.72
LDB18YLL049W YJL055WP47044 245 aa4.31□□□□□ -1.72
LDB18YLL049W MSS11Q03825 758 aa4.31□□□□□ -1.72
LDB18YLL049W FAR8Q05040 523 aa4.31□□□□□ -1.72
LDB18YLL049W RRT8Q08219 342 aa4.31□□□□□ -1.72
LDB18YLL049W NAM2P11325 894 aa4.3□□□□□ -1.72
LDB18YLL049W FEN2P25621 512 aaKnown RBP4.3□□□□□ -1.72
LDB18YLL049W YBR063CP38083 404 aa4.3□□□□□ -1.72
LDB18YLL049W YIL077CP40508 320 aa4.3□□□□□ -1.72
LDB18YLL049W IRC24P40580 263 aa4.3□□□□□ -1.72
LDB18YLL049W OST1P41543 476 aaKnown RBP4.3□□□□□ -1.72
LDB18YLL049W GCN20P43535 752 aaKnown RBP4.3□□□□□ -1.72
LDB18YLL049W YAP1802P53309 568 aa4.3□□□□□ -1.72
LDB18YLL049W WSC2P53832 503 aa4.3□□□□□ -1.72
LDB18YLL049W YMR166CQ03829 368 aa4.3□□□□□ -1.72
LDB18YLL049W RNH202Q05635 350 aa4.3□□□□□ -1.72
LDB18YLL049W SNT309Q06091 175 aaPredicted RBP4.3□□□□□ -1.72
LDB18YLL049W IRC25Q07951 179 aa4.3□□□□□ -1.72
LDB18YLL049W MCH4Q08268 501 aa4.3□□□□□ -1.72
LDB18YLL049W DEP1P31385 405 aa4.29□□□□□ -1.72
LDB18YLL049W TOA1P32773 286 aa4.29□□□□□ -1.72
LDB18YLL049W YBR241CP38142 488 aa4.29□□□□□ -1.72
LDB18YLL049W SLM1P40485 686 aa4.29□□□□□ -1.72
LDB18YLL049W DIA3P52290 468 aa4.29□□□□□ -1.72
LDB18YLL049W NSA1P53136 463 aaPredicted RBP4.29□□□□□ -1.72
LDB18YLL049W BNA7Q04066 261 aa4.29□□□□□ -1.72
LDB18YLL049W AIM6Q07716 390 aa4.29□□□□□ -1.72
LDB18YLL049W PSR1Q07800 427 aa4.29□□□□□ -1.72
LDB18YLL049W SFM1Q12314 213 aa4.29□□□□□ -1.72
LDB18YLL049W APC2Q12440 853 aa4.29□□□□□ -1.72
LDB18YLL049W PRP28P23394 588 aa4.28□□□□□ -1.72
LDB18YLL049W PCL1P24867 279 aa4.28□□□□□ -1.72
LDB18YLL049W RHB1P25378 209 aa4.28□□□□□ -1.72
LDB18YLL049W YME2P32843 850 aa4.28□□□□□ -1.72
LDB18YLL049W YOX1P34161 385 aa4.28□□□□□ -1.72
LDB18YLL049W ARO9P38840 513 aaPredicted RBP4.28□□□□□ -1.72
LDB18YLL049W PHO90P39535 881 aa4.28□□□□□ -1.72
LDB18YLL049W MTW1P39731 289 aa4.28□□□□□ -1.72
LDB18YLL049W FIP1P45976 327 aa4.28□□□□□ -1.72
LDB18YLL049W UFD1P53044 361 aa4.28□□□□□ -1.72
LDB18YLL049W COG2P53271 262 aa4.28□□□□□ -1.72
LDB18YLL049W YNL181WP53878 407 aa4.28□□□□□ -1.72
LDB18YLL049W TPS1Q00764 495 aaKnown RBP4.28□□□□□ -1.72
LDB18YLL049W YDC1Q02896 317 aa4.28□□□□□ -1.72
LDB18YLL049W RAD33Q04231 177 aa4.28□□□□□ -1.72
LDB18YLL049W UTP15Q04305 513 aaKnown RBP4.28□□□□□ -1.72
LDB18YLL049W RGC1Q06108 1083 aaKnown RBP4.28□□□□□ -1.72
LDB18YLL049W TMA10Q06177 86 aa4.28□□□□□ -1.72
LDB18YLL049W ARR3Q06598 404 aa4.28□□□□□ -1.72
LDB18YLL049W SKI7Q08491 747 aaPredicted RBP4.28□□□□□ -1.72
LDB18YLL049W GEP3Q08622 556 aa4.28□□□□□ -1.72
LDB18YLL049W ULA1Q12059 462 aa4.28□□□□□ -1.72
LDB18YLL049W YDL009CQ12210 107 aa4.28□□□□□ -1.72
LDB18YLL049W SCM3Q12334 223 aa4.28□□□□□ -1.72
LDB18YLL049W NCA2Q12374 616 aa4.28□□□□□ -1.72
LDB18YLL049W COX5BP00425 151 aa4.27□□□□□ -1.73
LDB18YLL049W DSF1P0CX08 502 aa4.27□□□□□ -1.73
LDB18YLL049W YNR073CP0CX09 502 aa4.27□□□□□ -1.73
LDB18YLL049W PET122P10355 254 aa4.27□□□□□ -1.73
LDB18YLL049W BOS1P25385 244 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 86.5 ms