RNA–Protein interactions for RNA: YDR511W

SDH7, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeast

Gene SDH7, Length 402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH7	YDR511W	COX16	P47081	118 aa		0.9	□□□□□ -2.27
SDH7	YDR511W	CAB5	Q03941	241 aa		0.9	□□□□□ -2.27
SDH7	YDR511W	YMR111C	Q04461	462 aa	Predicted RBP	0.9	□□□□□ -2.27
SDH7	YDR511W	YMR316C-A	I2HB70	103 aa		0.89	□□□□□ -2.27
SDH7	YDR511W	MSS116	P15424	664 aa	Known RBP	0.89	□□□□□ -2.27
SDH7	YDR511W	DPB2	P24482	689 aa	Predicted RBP	0.89	□□□□□ -2.27
SDH7	YDR511W	SFC1	P33303	322 aa		0.89	□□□□□ -2.27
SDH7	YDR511W	RPC37	P36121	282 aa		0.89	□□□□□ -2.27
SDH7	YDR511W	APE4	P38821	490 aa		0.89	□□□□□ -2.27
SDH7	YDR511W	END3	P39013	349 aa		0.89	□□□□□ -2.27
SDH7	YDR511W	AIM20	P40451	204 aa		0.89	□□□□□ -2.27
SDH7	YDR511W	TAD2	P47058	250 aa		0.89	□□□□□ -2.27
SDH7	YDR511W	FMP41	P53889	259 aa	Known RBP	0.89	□□□□□ -2.27
SDH7	YDR511W	CDC37	P06101	506 aa	Known RBP	0.88	□□□□□ -2.27
SDH7	YDR511W	PUT1	P09368	476 aa		0.88	□□□□□ -2.27
SDH7	YDR511W	SCM4	P32564	187 aa		0.88	□□□□□ -2.27
SDH7	YDR511W	GDH2	P33327	1092 aa	Known RBP	0.88	□□□□□ -2.27
SDH7	YDR511W	DRE2	P36152	348 aa		0.88	□□□□□ -2.27
SDH7	YDR511W	YIA6	P40556	373 aa		0.88	□□□□□ -2.27
SDH7	YDR511W	YPL077C	Q02831	240 aa		0.88	□□□□□ -2.27
SDH7	YDR511W	VPS60	Q03390	229 aa		0.88	□□□□□ -2.27
SDH7	YDR511W	PEX12	Q04370	399 aa		0.88	□□□□□ -2.27
SDH7	YDR511W	TAF9	Q05027	157 aa		0.88	□□□□□ -2.27
SDH7	YDR511W	SMT3	Q12306	101 aa	Known RBP	0.88	□□□□□ -2.27
SDH7	YDR511W	PET494	P07390	489 aa	Predicted RBP	0.87	□□□□□ -2.27
SDH7	YDR511W	PET18	P25362	215 aa		0.87	□□□□□ -2.27
SDH7	YDR511W	RPL5	P26321	297 aa	Known RBP	0.87	□□□□□ -2.27
SDH7	YDR511W	CAM1	P29547	415 aa	Known RBP	0.87	□□□□□ -2.27
SDH7	YDR511W	HMT1	P38074	348 aa		0.87	□□□□□ -2.27
SDH7	YDR511W	SNX4	P47057	423 aa		0.87	□□□□□ -2.27
SDH7	YDR511W	NIF3	P53081	288 aa		0.87	□□□□□ -2.27
SDH7	YDR511W	ASR1	Q06834	288 aa		0.87	□□□□□ -2.27
SDH7	YDR511W	SIA1	Q12212	622 aa		0.87	□□□□□ -2.27
SDH7	YDR511W	GEP5	Q12393	293 aa		0.87	□□□□□ -2.27
SDH7	YDR511W	RAD3	P06839	778 aa		0.86	□□□□□ -2.27
SDH7	YDR511W	CAR2	P07991	424 aa	Known RBP	0.86	□□□□□ -2.27
SDH7	YDR511W	PEP8	P40335	379 aa		0.86	□□□□□ -2.27
SDH7	YDR511W	VPS20	Q04272	221 aa		0.86	□□□□□ -2.27
SDH7	YDR511W	YLR297W	Q05899	129 aa		0.86	□□□□□ -2.27
SDH7	YDR511W	ATP6	P00854	259 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	PPH21	P23594	369 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	RNP1	P32385	249 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
SDH7	YDR511W	TEM1	P38987	245 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	SSO2	P39926	295 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	CDC40	P40968	455 aa	Predicted RBP	0.85	□□□□□ -2.27
SDH7	YDR511W	LOH1	P47055	219 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	GTO1	P48239	356 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	RIB4	P50861	169 aa	Predicted RBP	0.85	□□□□□ -2.27
SDH7	YDR511W	MDM34	P53083	459 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	DAD3	P69850	94 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	SDC1	Q03323	175 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	INM2	Q05533	292 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	POM33	Q12164	279 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	SAS5	Q99314	248 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	SPT7	P35177	1332 aa		0.85	□□□□□ -2.27
SDH7	YDR511W	CDC7	P06243	507 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	SGA1	P08019	549 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	SWI3	P32591	825 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	TDA11	P38854	504 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	AGX1	P43567	385 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	YJL028W	P47062	111 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	DBP6	P53734	629 aa	Known RBP	0.84	□□□□□ -2.27
SDH7	YDR511W	MGR3	Q04472	501 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	LOA1	Q06508	300 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	PST1	Q12355	444 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	MHT1	Q12525	324 aa		0.84	□□□□□ -2.27
SDH7	YDR511W	YOL162W	P0CF19	215 aa		0.83	□□□□□ -2.28
SDH7	YDR511W	COS2	P0CX12	379 aa		0.83	□□□□□ -2.28
SDH7	YDR511W	COS3	P0CX13	379 aa		0.83	□□□□□ -2.28
SDH7	YDR511W	SAR1	P20606	190 aa	Known RBP	0.83	□□□□□ -2.28
SDH7	YDR511W	BLI1	P35727	113 aa		0.83	□□□□□ -2.28
SDH7	YDR511W	MAL32	P38158	584 aa		0.83	□□□□□ -2.28
SDH7	YDR511W	YHB1	P39676	399 aa	Known RBP	0.83	□□□□□ -2.28
SDH7	YDR511W	YER135C	P40082	130 aa		0.83	□□□□□ -2.28
SDH7	YDR511W	IBA57	P47158	497 aa		0.83	□□□□□ -2.28
SDH7	YDR511W	VOA1	P53262	265 aa		0.83	□□□□□ -2.28
SDH7	YDR511W	MAL12	P53341	584 aa		0.83	□□□□□ -2.28
SDH7	YDR511W	YAL064W-B	O13512	126 aa		0.82	□□□□□ -2.28
SDH7	YDR511W	ILV1	P00927	576 aa	Known RBP	0.82	□□□□□ -2.28
SDH7	YDR511W	CCA1	P21269	546 aa		0.82	□□□□□ -2.28
SDH7	YDR511W	NPT1	P39683	429 aa	Known RBP	0.82	□□□□□ -2.28
SDH7	YDR511W	KEL2	P50090	882 aa		0.82	□□□□□ -2.28
SDH7	YDR511W	PRM15	Q03262	622 aa		0.82	□□□□□ -2.28
SDH7	YDR511W	YDR286C	Q05530	114 aa		0.82	□□□□□ -2.28
SDH7	YDR511W	RRG8	Q06109	277 aa		0.82	□□□□□ -2.28
SDH7	YDR511W	BOP2	Q06150	570 aa		0.82	□□□□□ -2.28
SDH7	YDR511W	PGC1	Q08959	321 aa		0.82	□□□□□ -2.28
SDH7	YDR511W	RPS3	P05750	240 aa	Known RBP	0.81	□□□□□ -2.28
SDH7	YDR511W	POX1	P13711	748 aa		0.81	□□□□□ -2.28
SDH7	YDR511W	VMA2	P16140	517 aa	Known RBP	0.81	□□□□□ -2.28
SDH7	YDR511W	ICL1	P28240	557 aa	Predicted RBP	0.81	□□□□□ -2.28
SDH7	YDR511W	RPC25	P35718	212 aa		0.81	□□□□□ -2.28
SDH7	YDR511W	YKR045C	P36138	183 aa		0.81	□□□□□ -2.28
SDH7	YDR511W	AGP3	P43548	558 aa		0.81	□□□□□ -2.28
SDH7	YDR511W	PRO2	P54885	456 aa	Known RBP	0.81	□□□□□ -2.28
SDH7	YDR511W	ABZ2	Q03266	374 aa		0.81	□□□□□ -2.28
SDH7	YDR511W	GPN3	Q06543	272 aa		0.81	□□□□□ -2.28
SDH7	YDR511W	BER1	Q06688	274 aa	Known RBP	0.81	□□□□□ -2.28
SDH7	YDR511W	VAC14	Q06708	880 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms