RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W AIM23P47015 356 aa5.33□□□□□ -1.56
SUB2YDL084W ZAP1P47043 880 aa5.33□□□□□ -1.56
SUB2YDL084W STE24P47154 453 aa5.33□□□□□ -1.56
SUB2YDL084W RPL9BP51401 191 aaKnown RBP5.33□□□□□ -1.56
SUB2YDL084W STR3P53101 465 aaKnown RBP5.33□□□□□ -1.56
SUB2YDL084W YGL101WP53144 215 aa5.33□□□□□ -1.56
SUB2YDL084W YGL039WP53183 348 aaKnown RBP5.33□□□□□ -1.56
SUB2YDL084W JAC1P53193 184 aa5.33□□□□□ -1.56
SUB2YDL084W YGR283CP53336 341 aaPredicted RBP5.33□□□□□ -1.56
SUB2YDL084W MPA43P53583 542 aaPredicted RBP5.33□□□□□ -1.56
SUB2YDL084W ERG13P54839 491 aaKnown RBP5.33□□□□□ -1.56
SUB2YDL084W SED5Q01590 340 aa5.33□□□□□ -1.56
SUB2YDL084W SMP3Q04174 516 aa5.33□□□□□ -1.56
SUB2YDL084W HRD3Q05787 833 aa5.33□□□□□ -1.56
SUB2YDL084W YHC1Q05900 231 aaKnown RBP5.33□□□□□ -1.56
SUB2YDL084W SEI1Q06058 285 aa5.33□□□□□ -1.56
SUB2YDL084W CNL1Q06333 122 aa5.33□□□□□ -1.56
SUB2YDL084W NOC4Q06512 552 aaPredicted RBP5.33□□□□□ -1.56
SUB2YDL084W GPB1Q08886 897 aa5.33□□□□□ -1.56
SUB2YDL084W YOR283WQ12040 230 aaKnown RBP5.33□□□□□ -1.56
SUB2YDL084W YPR071WQ12346 211 aa5.33□□□□□ -1.56
SUB2YDL084W POM34Q12445 299 aa5.33□□□□□ -1.56
SUB2YDL084W ERG27Q12452 347 aaKnown RBP5.33□□□□□ -1.56
SUB2YDL084W ATG2P53855 1592 aa5.33□□□□□ -1.56
SUB2YDL084W SWR1Q05471 1514 aa5.33□□□□□ -1.56
SUB2YDL084W COX5BP00425 151 aa5.32□□□□□ -1.56
SUB2YDL084W VAR1P02381 398 aa5.32□□□□□ -1.56
SUB2YDL084W ADE4P04046 510 aaKnown RBP5.32□□□□□ -1.56
SUB2YDL084W ALG7P07286 448 aa5.32□□□□□ -1.56
SUB2YDL084W MSS51P32335 436 aa5.32□□□□□ -1.56
SUB2YDL084W SRB6P32570 121 aa5.32□□□□□ -1.56
SUB2YDL084W UTR2P32623 467 aa5.32□□□□□ -1.56
SUB2YDL084W FRE1P32791 686 aa5.32□□□□□ -1.56
SUB2YDL084W YOR062CP36025 268 aa5.32□□□□□ -1.56
SUB2YDL084W IRS4P36115 615 aaKnown RBP5.32□□□□□ -1.56
SUB2YDL084W YBR137WP38276 179 aa5.32□□□□□ -1.56
SUB2YDL084W YBR285WP38354 144 aa5.32□□□□□ -1.56
SUB2YDL084W FSH1P38777 243 aaKnown RBP5.32□□□□□ -1.56
SUB2YDL084W CEM1P39525 442 aa5.32□□□□□ -1.56
SUB2YDL084W BMT5P40493 336 aa5.32□□□□□ -1.56
SUB2YDL084W IST3P40565 148 aaPredicted RBP5.32□□□□□ -1.56
SUB2YDL084W GLR1P41921 483 aaKnown RBP5.32□□□□□ -1.56
SUB2YDL084W YGR149WP48236 432 aa5.32□□□□□ -1.56
SUB2YDL084W NIF3P53081 288 aa5.32□□□□□ -1.56
SUB2YDL084W YIP5P53108 310 aa5.32□□□□□ -1.56
SUB2YDL084W NSG2P53898 299 aa5.32□□□□□ -1.56
SUB2YDL084W YDR366CP87287 132 aa5.32□□□□□ -1.56
SUB2YDL084W SHR3Q02774 210 aa5.32□□□□□ -1.56
SUB2YDL084W PLB2Q03674 706 aa5.32□□□□□ -1.56
SUB2YDL084W RAV2Q03956 351 aa5.32□□□□□ -1.56
SUB2YDL084W SHH3Q04487 196 aa5.32□□□□□ -1.56
SUB2YDL084W PRM6Q04705 352 aa5.32□□□□□ -1.56
SUB2YDL084W RNH202Q05635 350 aa5.32□□□□□ -1.56
SUB2YDL084W PLB3Q08108 686 aa5.32□□□□□ -1.56
SUB2YDL084W HNT3Q08702 217 aa5.32□□□□□ -1.56
SUB2YDL084W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
SUB2YDL084W ALG6Q12001 544 aaKnown RBP5.32□□□□□ -1.56
SUB2YDL084W FRE8Q12209 686 aa5.32□□□□□ -1.56
SUB2YDL084W YCR075W-AQ3E830 75 aa5.32□□□□□ -1.56
SUB2YDL084W ATP5P09457 212 aa5.31□□□□□ -1.56
SUB2YDL084W GLN3P18494 730 aa5.31□□□□□ -1.56
SUB2YDL084W GPI12P23797 304 aa5.31□□□□□ -1.56
SUB2YDL084W SSS1P35179 80 aa5.31□□□□□ -1.56
SUB2YDL084W YBR013CP38215 129 aa5.31□□□□□ -1.56
SUB2YDL084W TOS1P38288 455 aa5.31□□□□□ -1.56
SUB2YDL084W YPT35P38815 214 aaKnown RBP5.31□□□□□ -1.56
SUB2YDL084W AYR1P40471 297 aa5.31□□□□□ -1.56
SUB2YDL084W SNN1P48232 102 aa5.31□□□□□ -1.56
SUB2YDL084W MRH4P53166 561 aa5.31□□□□□ -1.56
SUB2YDL084W CDH1P53197 566 aa5.31□□□□□ -1.56
SUB2YDL084W TY1A-MR1Q04215 440 aa5.31□□□□□ -1.56
SUB2YDL084W YDL085C-AQ3E7B7 68 aaKnown RBP5.31□□□□□ -1.56
SUB2YDL084W YBR085C-AO43137 85 aa5.3□□□□□ -1.56
SUB2YDL084W CYC7P00045 113 aa5.3□□□□□ -1.56
SUB2YDL084W FLP1P03870 423 aa5.3□□□□□ -1.56
SUB2YDL084W YER190C-BP0CX94 160 aa5.3□□□□□ -1.56
SUB2YDL084W YEL077W-AP0CX95 160 aa5.3□□□□□ -1.56
SUB2YDL084W YGR296C-BP0CX96 160 aa5.3□□□□□ -1.56
SUB2YDL084W YPL283W-BP0CX97 160 aa5.3□□□□□ -1.56
SUB2YDL084W YPR204C-AP0CX98 160 aa5.3□□□□□ -1.56
SUB2YDL084W FCY2P17064 533 aa5.3□□□□□ -1.56
SUB2YDL084W FUN14P18411 198 aa5.3□□□□□ -1.56
SUB2YDL084W PHO80P20052 293 aa5.3□□□□□ -1.56
SUB2YDL084W LSB5P25369 354 aa5.3□□□□□ -1.56
SUB2YDL084W PTC6P25646 442 aa5.3□□□□□ -1.56
SUB2YDL084W MGT1P26188 188 aa5.3□□□□□ -1.56
SUB2YDL084W TIR2P33890 251 aa5.3□□□□□ -1.56
SUB2YDL084W YKL107WP34251 309 aa5.3□□□□□ -1.56
SUB2YDL084W FRE2P36033 711 aa5.3□□□□□ -1.56
SUB2YDL084W DOG1P38774 246 aa5.3□□□□□ -1.56
SUB2YDL084W ARO9P38840 513 aaPredicted RBP5.3□□□□□ -1.56
SUB2YDL084W TIF34P40217 347 aaKnown RBP5.3□□□□□ -1.56
SUB2YDL084W LST7P53237 242 aa5.3□□□□□ -1.56
SUB2YDL084W NRD1P53617 575 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
SUB2YDL084W SLM2P53955 656 aa5.3□□□□□ -1.56
SUB2YDL084W SMX3P54999 86 aaPredicted RBP5.3□□□□□ -1.56
SUB2YDL084W YMR034CQ05131 434 aaPredicted RBP5.3□□□□□ -1.56
SUB2YDL084W MCH1Q07376 486 aa5.3□□□□□ -1.56
SUB2YDL084W NUS1Q12063 375 aa5.3□□□□□ -1.56
SUB2YDL084W TFC7Q12415 435 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms