RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	SUE1	Q06524	206 aa		4.33	□□□□□ -1.72
SIR2	YDL042C	ERP3	Q12403	225 aa		4.33	□□□□□ -1.72
SIR2	YDL042C	ZIP1	P31111	875 aa		4.32	□□□□□ -1.72
SIR2	YDL042C	YKL063C	P35725	167 aa		4.32	□□□□□ -1.72
SIR2	YDL042C	RRG9	P40156	214 aa		4.32	□□□□□ -1.72
SIR2	YDL042C	UFE1	P41834	346 aa		4.32	□□□□□ -1.72
SIR2	YDL042C	UBC13	P52490	153 aa		4.32	□□□□□ -1.72
SIR2	YDL042C	MND1	P53102	219 aa		4.32	□□□□□ -1.72
SIR2	YDL042C	YLR446W	Q06204	433 aa		4.32	□□□□□ -1.72
SIR2	YDL042C	LAG2	Q92325	660 aa		4.32	□□□□□ -1.72
SIR2	YDL042C	PEX18	P38855	283 aa		4.32	□□□□□ -1.72
SIR2	YDL042C	RRP42	Q12277	265 aa	Predicted RBP	4.32	□□□□□ -1.72
SIR2	YDL042C	ATP6	P00854	259 aa		4.31	□□□□□ -1.72
SIR2	YDL042C	OM45	P16547	393 aa		4.31	□□□□□ -1.72
SIR2	YDL042C	ZRT3	P34240	503 aa		4.31	□□□□□ -1.72
SIR2	YDL042C	GDS1	P41913	522 aa		4.31	□□□□□ -1.72
SIR2	YDL042C	AGP3	P43548	558 aa		4.31	□□□□□ -1.72
SIR2	YDL042C	YPL077C	Q02831	240 aa		4.31	□□□□□ -1.72
SIR2	YDL042C	GMC1	Q04399	608 aa		4.31	□□□□□ -1.72
SIR2	YDL042C	BER1	Q06688	274 aa	Known RBP	4.31	□□□□□ -1.72
SIR2	YDL042C	ASR1	Q06834	288 aa		4.31	□□□□□ -1.72
SIR2	YDL042C	YOR292C	Q08743	309 aa		4.31	□□□□□ -1.72
SIR2	YDL042C	IFM1	P25038	676 aa		4.3	□□□□□ -1.72
SIR2	YDL042C	TDA11	P38854	504 aa		4.3	□□□□□ -1.72
SIR2	YDL042C	YMR321C	Q04898	105 aa		4.3	□□□□□ -1.72
SIR2	YDL042C	MRX8	Q05473	314 aa		4.3	□□□□□ -1.72
SIR2	YDL042C	VIK1	Q12045	647 aa		4.3	□□□□□ -1.72
SIR2	YDL042C	TFC7	Q12415	435 aa		4.3	□□□□□ -1.72
SIR2	YDL042C	YPR064W	Q12492	139 aa		4.3	□□□□□ -1.72
SIR2	YDL042C	TAO3	P40468	2376 aa		4.3	□□□□□ -1.72
SIR2	YDL042C	MATALPHA2	P0CY08	210 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	HMLALPHA2	P0CY09	210 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	MIC19	P43594	170 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	VTI1	Q04338	217 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	ECM19	Q06011	112 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	YDL012C	Q12489	107 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	MYO1	P08964	1928 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	IMP3	P32899	183 aa	Predicted RBP	4.29	□□□□□ -1.72
SIR2	YDL042C	RPC37	P36121	282 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	YIL054W	P40524	105 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	SEC13	Q04491	297 aa	Known RBP	4.29	□□□□□ -1.72
SIR2	YDL042C	GPN3	Q06543	272 aa		4.29	□□□□□ -1.72
SIR2	YDL042C	DFM1	Q12743	341 aa	Known RBP	4.29	□□□□□ -1.72
SIR2	YDL042C	FUS3	P16892	353 aa	Known RBP	4.28	□□□□□ -1.72
SIR2	YDL042C	CKA2	P19454	339 aa		4.28	□□□□□ -1.72
SIR2	YDL042C	COX10	P21592	462 aa		4.28	□□□□□ -1.72
SIR2	YDL042C	BMH2	P34730	273 aa	Known RBP	4.28	□□□□□ -1.72
SIR2	YDL042C	GPX1	P36014	167 aa		4.28	□□□□□ -1.72
SIR2	YDL042C	OPY1	P38271	328 aa		4.28	□□□□□ -1.72
SIR2	YDL042C	LIF1	P53150	421 aa		4.28	□□□□□ -1.72
SIR2	YDL042C	LSB1	P53281	241 aa		4.28	□□□□□ -1.72
SIR2	YDL042C	TRM10	Q12400	293 aa		4.28	□□□□□ -1.72
SIR2	YDL042C	PRP46	Q12417	451 aa	Predicted RBP	4.28	□□□□□ -1.72
SIR2	YDL042C	FMP16	Q12497	93 aa		4.28	□□□□□ -1.72
SIR2	YDL042C	SHQ1	P40486	507 aa	Predicted RBP	4.27	□□□□□ -1.73
SIR2	YDL042C	POM33	Q12164	279 aa		4.27	□□□□□ -1.73
SIR2	YDL042C	SSA3	P09435	649 aa	Known RBP	4.26	□□□□□ -1.73
SIR2	YDL042C	POX1	P13711	748 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	FRS2	P15625	503 aa	Known RBP	4.26	□□□□□ -1.73
SIR2	YDL042C	FRM2	P37261	193 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	YBR062C	P38239	180 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	FRT2	P39734	528 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	YGL118C	P53132	145 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	RNY1	Q02933	434 aa	Known RBP	4.26	□□□□□ -1.73
SIR2	YDL042C	TAZ1	Q06510	381 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	YDL211C	Q12121	372 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	VPS1	P21576	704 aa	Known RBP	4.26	□□□□□ -1.73
SIR2	YDL042C	CDC13	P32797	924 aa	Known RBP	4.26	□□□□□ -1.73
SIR2	YDL042C	RIB7	P33312	244 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	TPO5	P36029	618 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	BDH1	P39714	382 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	PEX30	Q06169	523 aa		4.26	□□□□□ -1.73
SIR2	YDL042C	ECM29	P38737	1868 aa		4.25	□□□□□ -1.73
SIR2	YDL042C	ILV1	P00927	576 aa	Known RBP	4.25	□□□□□ -1.73
SIR2	YDL042C	TFS1	P14306	219 aa		4.25	□□□□□ -1.73
SIR2	YDL042C	RPB9	P27999	122 aa		4.25	□□□□□ -1.73
SIR2	YDL042C	SKG6	P32900	734 aa	Predicted RBP	4.25	□□□□□ -1.73
SIR2	YDL042C	YIA6	P40556	373 aa		4.25	□□□□□ -1.73
SIR2	YDL042C	MRPL6	P32904	214 aa		4.24	□□□□□ -1.73
SIR2	YDL042C	FMP33	P46998	180 aa		4.24	□□□□□ -1.73
SIR2	YDL042C	EMC2	P47133	292 aa	Known RBP	4.24	□□□□□ -1.73
SIR2	YDL042C	YPT32	P51996	222 aa	Known RBP	4.24	□□□□□ -1.73
SIR2	YDL042C	YPL150W	Q12152	901 aa		4.24	□□□□□ -1.73
SIR2	YDL042C	RRP36	Q12481	300 aa	Predicted RBP	4.24	□□□□□ -1.73
SIR2	YDL042C	YSR3	P23501	404 aa		4.23	□□□□□ -1.73
SIR2	YDL042C	TRR2	P38816	342 aa		4.23	□□□□□ -1.73
SIR2	YDL042C	GAA1	P39012	614 aa		4.23	□□□□□ -1.73
SIR2	YDL042C	RPN14	P53196	417 aa		4.23	□□□□□ -1.73
SIR2	YDL042C	HST4	P53688	370 aa		4.23	□□□□□ -1.73
SIR2	YDL042C	YPL278C	Q08990	100 aa		4.23	□□□□□ -1.73
SIR2	YDL042C	YPR117W	Q06116	2489 aa		4.23	□□□□□ -1.73
SIR2	YDL042C	RME1	P32338	300 aa	Known RBP	4.22	□□□□□ -1.73
SIR2	YDL042C	SPT4	P32914	102 aa	Predicted RBP	4.22	□□□□□ -1.73
SIR2	YDL042C	MRX5	P47007	382 aa		4.22	□□□□□ -1.73
SIR2	YDL042C	CAX4	P53223	239 aa		4.22	□□□□□ -1.73
SIR2	YDL042C	SPP2	Q02521	185 aa		4.22	□□□□□ -1.73
SIR2	YDL042C	IES4	Q08561	116 aa		4.22	□□□□□ -1.73
SIR2	YDL042C	CCH1	P50077	2039 aa		4.22	□□□□□ -1.73
SIR2	YDL042C	TDH1	P00360	332 aa	Known RBP	4.22	□□□□□ -1.73
SIR2	YDL042C	CPT1	P17898	393 aa		4.22	□□□□□ -1.73

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