RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 PRAMEF18Q5VWM3 479 aa18.1■□□□□ 0.49
PHGDH-223ENST00000641597 PCNX4Q63HM2 1172 aa18.1■□□□□ 0.49
PHGDH-223ENST00000641597 RHOT2Q8IXI1 618 aa18.1■□□□□ 0.49
PHGDH-223ENST00000641597 RAPGEF5Q92565 580 aa18.1■□□□□ 0.49
PHGDH-223ENST00000641597 ZNF653Q96CK0 615 aa18.1■□□□□ 0.49
PHGDH-223ENST00000641597 FAM118BQ9BPY3 351 aa18.1■□□□□ 0.49
PHGDH-223ENST00000641597 TBX20Q9UMR3 447 aa18.1■□□□□ 0.49
PHGDH-223ENST00000641597 GOLGA6L10A0A0M3HER8 536 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 ZNF862O60290 1169 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 CYP11B1P15538 503 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 PPP2R2AP63151 447 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 CXCL9Q07325 125 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 SNX1Q13596 522 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 CCDC137Q6PK04 289 aaKnown RBP18.09■□□□□ 0.49
PHGDH-223ENST00000641597 ZNF564Q8TBZ8 553 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-223ENST00000641597 HELQQ8TDG4 1101 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.09■□□□□ 0.49
PHGDH-223ENST00000641597 HERPUD2Q9BSE4 406 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 DNAJC17Q9NVM6 304 aaKnown RBP18.09■□□□□ 0.49
PHGDH-223ENST00000641597 DBR1Q9UK59 544 aaKnown RBP18.09■□□□□ 0.49
PHGDH-223ENST00000641597 CAPN7Q9Y6W3 813 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 O00370 1275 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 SPOPO43791 374 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 RTN2O75298 545 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 FAM107AO95990 144 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 RARAP10276 462 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 CETN1Q12798 172 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 PARD3BQ8TEW8 1205 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 C1orf54Q8WWF1 131 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 ATG4AQ8WYN0 398 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 MTFR1LQ9H019 292 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 RAB17Q9H0T7 212 aa18.09■□□□□ 0.49
PHGDH-223ENST00000641597 CLDN3O15551 220 aa18.08■□□□□ 0.49
PHGDH-223ENST00000641597 PMS2P54278 862 aa18.08■□□□□ 0.49
PHGDH-223ENST00000641597 TNIP1Q15025 636 aa18.08■□□□□ 0.49
PHGDH-223ENST00000641597 CCDC38Q502W7 563 aa18.08■□□□□ 0.49
PHGDH-223ENST00000641597 CCDC25Q86WR0 208 aa18.08■□□□□ 0.49
PHGDH-223ENST00000641597 TTLL6Q8N841 843 aa18.08■□□□□ 0.49
PHGDH-223ENST00000641597 SUPT20HQ8NEM7 779 aa18.08■□□□□ 0.49
PHGDH-223ENST00000641597 EPS8L3Q8TE67 593 aaKnown RBP18.08■□□□□ 0.49
PHGDH-223ENST00000641597 SLC38A10Q9HBR0 1119 aa18.08■□□□□ 0.49
PHGDH-223ENST00000641597 PCDHA3Q9Y5H8 950 aa18.08■□□□□ 0.49
PHGDH-223ENST00000641597 MEFVO15553 781 aaPredicted RBP18.08■□□□□ 0.48
PHGDH-223ENST00000641597 PHF2O75151 1096 aa18.08■□□□□ 0.48
PHGDH-223ENST00000641597 CFHP08603 1231 aa18.08■□□□□ 0.48
PHGDH-223ENST00000641597 KRT5P13647 590 aa18.08■□□□□ 0.48
PHGDH-223ENST00000641597 DPEP1P16444 411 aa18.08■□□□□ 0.48
PHGDH-223ENST00000641597 TRIP13Q15645 432 aaPredicted RBP18.08■□□□□ 0.48
PHGDH-223ENST00000641597 OTUD6BQ8N6M0 293 aa18.08■□□□□ 0.48
PHGDH-223ENST00000641597 SHC3Q92529 594 aa18.08■□□□□ 0.48
PHGDH-223ENST00000641597 CD101Q93033 1021 aa18.08■□□□□ 0.48
PHGDH-223ENST00000641597 PDCD2LQ9BRP1 358 aa18.08■□□□□ 0.48
PHGDH-223ENST00000641597 DDX20Q9UHI6 824 aaKnown RBP18.08■□□□□ 0.48
PHGDH-223ENST00000641597 TRAPPC3O43617 180 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 PLA2G6O60733 806 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 ATP2C2O75185 946 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 NCKAP1LP55160 1127 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 BAATQ14032 418 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-223ENST00000641597 C11orf63Q6NUN7 778 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 RUFY4Q6ZNE9 571 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 SV2AQ7L0J3 742 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 C1orf131Q8NDD1 294 aaKnown RBP18.07■□□□□ 0.48
PHGDH-223ENST00000641597 NEK9Q8TD19 979 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 ATG4CQ96DT6 458 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 PWWP2AQ96N64 755 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 AZI2Q9H6S1 392 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 TCEAL9Q9UHQ7 104 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 GMNCA6NCL1 334 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 GRIN3BO60391 1043 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 PEX10O60683 326 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 MTMR3Q13615 1198 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 SIX1Q15475 284 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-223ENST00000641597 SPOPLQ6IQ16 392 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 KCNV1Q6PIU1 500 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 CCDC105Q8IYK2 499 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 UBL4BQ8N7F7 174 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 CPA5Q8WXQ8 436 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 PSMD1Q99460 953 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 GABBR1Q9UBS5 961 aa18.07■□□□□ 0.48
PHGDH-223ENST00000641597 TBC1D12O60347 775 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 CLSTN1O94985 981 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 KCNA3P22001 575 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 PSMC5P62195 406 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 BIRC3Q13489 604 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 RNF207Q6ZRF8 634 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 CYFIP1Q7L576 1253 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 POMGNT1Q8WZA1 660 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 DDX1Q92499 740 aaKnown RBP18.06■□□□□ 0.48
PHGDH-223ENST00000641597 FAM213AQ9BRX8 229 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 DEFB129Q9H1M3 183 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 PXMP2Q9NR77 195 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 FER1L6Q2WGJ9 1857 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 CTNNA2P26232 953 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 PDE4CQ08493 712 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 BYSLQ13895 437 aaKnown RBP18.06■□□□□ 0.48
PHGDH-223ENST00000641597 MYBPC2Q14324 1141 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 ARHGEF16Q5VV41 709 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 KRT39Q6A163 491 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 B4GALNT4Q76KP1 1039 aa18.06■□□□□ 0.48
PHGDH-223ENST00000641597 CEP170P1Q96L14 293 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms