RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CCDC170Q8IYT3 715 aa9.61□□□□□ -0.87
PHGDH-219ENST00000641513 TRIB2Q92519 343 aa9.61□□□□□ -0.87
PHGDH-219ENST00000641513 GOLGA1Q92805 767 aa9.61□□□□□ -0.87
PHGDH-219ENST00000641513 ZBTB45Q96K62 511 aaPredicted RBP9.61□□□□□ -0.87
PHGDH-219ENST00000641513 SPAG5Q96R06 1193 aa9.61□□□□□ -0.87
PHGDH-219ENST00000641513 CHP1Q99653 195 aa9.61□□□□□ -0.87
PHGDH-219ENST00000641513 DEF6Q9H4E7 631 aa9.61□□□□□ -0.87
PHGDH-219ENST00000641513 GTPBP10A4D1E9 387 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 RRN3P2A6NIE6 340 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 KIAA0391O15091 583 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 CLDN3O15551 220 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 EXTL3O43909 919 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 NOL4O94818 638 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 CLSTN1O94985 981 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 IPO7O95373 1038 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 LDHAP00338 332 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 SMIM10L2AP0DMW4 78 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 SMIM10L2BP0DMW5 78 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 DLATP10515 647 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 HOXD8P13378 290 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 ZSCAN20P17040 1043 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 HOXD10P28358 340 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 HNRNPH3P31942 346 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 ACOT2P49753 483 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 IRX5P78411 483 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 MAP2K1Q02750 393 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 ARID5AQ03989 594 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 CYP24A1Q07973 514 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 PRPF4BQ13523 1007 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 ASIC2Q16515 512 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 ERCC6LQ2NKX8 1250 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 CBWD6Q4V339 395 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 ARHGAP29Q52LW3 1261 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 TDRD12Q587J7 1177 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 CBWD3Q5JTY5 395 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 CBWD5Q5RIA9 395 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 KLHDC7AQ5VTJ3 777 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 CDCA2Q69YH5 1023 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 SRGAP1Q7Z6B7 1085 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 ACRBPQ8NEB7 543 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 TRPV1Q8NER1 839 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 CD99L2Q8TCZ2 262 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 HNRNPLLQ8WVV9 542 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 NLRP7Q8WX94 980 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 FNBP1Q96RU3 617 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 WDR24Q96S15 920 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 KATNAL1Q9BW62 490 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 INTS2Q9H0H0 1204 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 FAM49AQ9H0Q0 323 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
PHGDH-219ENST00000641513 GANQ9H2C0 597 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 HAUS4Q9H6D7 363 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 SPC25Q9HBM1 224 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 KIAA1586Q9HCI6 787 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 PLCB1Q9NQ66 1216 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 SETD4Q9NVD3 440 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 RNF186Q9NXI6 227 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 CDC23Q9UJX2 597 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 Q9Y3F1 56 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 FHOD1Q9Y613 1164 aa9.6□□□□□ -0.87
PHGDH-219ENST00000641513 A0A087WZ62 844 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 CTAGE9A4FU28 777 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 CCDC151A5D8V7 595 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 AKR1B10O60218 316 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 ZEB2O60315 1214 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 DUSP11O75319 330 aaKnown RBP9.59□□□□□ -0.87
PHGDH-219ENST00000641513 F2P00734 622 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 PIGRP01833 764 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 EDN1P05305 212 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 RARBP10826 455 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 CYP2C9P11712 490 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 CYBAP13498 195 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 ELNP15502 786 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 TNNI1P19237 187 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 VEGFBP49765 207 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 MXI1P50539 228 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 NLRP11P59045 1033 aaKnown RBP9.59□□□□□ -0.87
PHGDH-219ENST00000641513 PTENP60484 403 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 KRT83P78385 493 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 PPP3CAQ08209 521 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 TMEM62Q0P6H9 643 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 TRIM32Q13049 653 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 BRD3Q15059 726 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 SEZ6Q53EL9 994 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 GNASQ5JWF2 1037 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 ATF7IP2Q5U623 682 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 NFRKBQ6P4R8 1299 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 GJB7Q6PEY0 223 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 WDR59Q6PJI9 974 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 TMCO3Q6UWJ1 677 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 ZPBP2Q6X784 338 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 KIAA1328Q86T90 577 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 MSANTD4Q8NCY6 345 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 RAET1EQ8TD07 263 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 PLEKHO2Q8TD55 490 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 TMEM174Q8WUU8 243 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 LMBR1Q8WVP7 490 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 BAP1Q92560 729 aa9.59□□□□□ -0.87
PHGDH-219ENST00000641513 FAM212AQ96EL1 285 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms