RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 STPG1Q5TH74 334 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 PSAPL1Q6NUJ1 521 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 LILRA6Q6PI73 481 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 PRSS55Q6UWB4 352 aaPredicted RBP8.8□□□□□ -1
PHGDH-217ENST00000641455 MRPL10Q7Z7H8 261 aaKnown RBP8.8□□□□□ -1
PHGDH-217ENST00000641455 KSR1Q8IVT5 923 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 RNF168Q8IYW5 571 aaPredicted RBP8.8□□□□□ -1
PHGDH-217ENST00000641455 TMTC2Q8N394 836 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 FAM160A2Q8N612 972 aaPredicted RBP8.8□□□□□ -1
PHGDH-217ENST00000641455 MCRS1Q96EZ8 462 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 GAD1Q99259 594 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 SH2D3AQ9BRG2 576 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 GPR62Q9BZJ7 368 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 GLT8D2Q9H1C3 349 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 BRD9Q9H8M2 597 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 CHST7Q9NS84 486 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 HCFC1R1Q9NWW0 138 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 FNIP2Q9P278 1114 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 LHX6Q9UPM6 363 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 MRPS23Q9Y3D9 190 aaKnown RBP8.8□□□□□ -1
PHGDH-217ENST00000641455 ANKRD11Q6UB99 2663 aaPredicted RBP8.8□□□□□ -1
PHGDH-217ENST00000641455 F5P12259 2224 aa8.8□□□□□ -1
PHGDH-217ENST00000641455 TMEM150BA6NC51 233 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 ARL5CA6NH57 179 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 SH2B2O14492 632 aaPredicted RBP8.79□□□□□ -1
PHGDH-217ENST00000641455 AXIN1O15169 862 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 TADA2AO75478 443 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 ECI2O75521 394 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 CNR2P34972 360 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 NOVA1P51513 510 aaKnown RBP8.79□□□□□ -1
PHGDH-217ENST00000641455 LIMK1P53667 647 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 GRM2Q14416 872 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 SYNE3Q6ZMZ3 975 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 CEP57Q86XR8 500 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 TEX2Q8IWB9 1127 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 FANCBQ8NB91 859 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 CNNM3Q8NE01 707 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 SLC7A14Q8TBB6 771 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 FAM3CQ92520 227 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 RABGGTAQ92696 567 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 DNASE1L2Q92874 299 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 MBOAT7Q96N66 472 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 PLA2G2FQ9BZM2 168 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 ARRDC1-AS1Q9H2J1 176 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 UBN1Q9NPG3 1134 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 ADAM28Q9UKQ2 775 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 GREB1Q4ZG55 1949 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 CEP295Q9C0D2 2601 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 CNTNAP5Q8WYK1 1306 aa8.79□□□□□ -1
PHGDH-217ENST00000641455 DDX11L8A8MPP1 907 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 GAS7O60861 476 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 ERLIN2O94905 339 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 CYP3A4P08684 503 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 SRGAP2CP0DJJ0 459 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 SPINK2P20155 84 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 HOXA9P31269 272 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 MCM5P33992 734 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 JAK3P52333 1124 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 DSC1Q08554 894 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 HDAC1Q13547 482 aaPredicted RBP8.78□□□□□ -1
PHGDH-217ENST00000641455 TARBP2Q15633 366 aaKnown RBP8.78□□□□□ -1
PHGDH-217ENST00000641455 PSMD5Q16401 504 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 XKR3Q5GH77 459 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 RTP2Q5QGT7 225 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 UBXN11Q5T124 520 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 TANGO2Q6ICL3 276 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 LRSAM1Q6UWE0 723 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 MIER3Q7Z3K6 550 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 LONP2Q86WA8 852 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 KDF1Q8NAX2 398 aaPredicted RBP8.78□□□□□ -1
PHGDH-217ENST00000641455 HASPINQ8TF76 798 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 RUFY2Q8WXA3 655 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 ZCCHC14Q8WYQ9 949 aaKnown RBP8.78□□□□□ -1
PHGDH-217ENST00000641455 TMEM87BQ96K49 555 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 ZFP42Q96MM3 310 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 TEKT3Q9BXF9 490 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 LRRC2Q9BYS8 371 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 RXFP3Q9NSD7 469 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 MIOSQ9NXC5 875 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 DNMT3BQ9UBC3 853 aaKnown RBP8.78□□□□□ -1
PHGDH-217ENST00000641455 KCNH3Q9ULD8 1083 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 HES2Q9Y543 173 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 IPPQ9Y573 584 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 COL4A3BPQ9Y5P4 624 aa8.78□□□□□ -1
PHGDH-217ENST00000641455 SF3B1O75533 1304 aaKnown RBP eCLIP8.78□□□□□ -1
PHGDH-217ENST00000641455 IGF2RP11717 2491 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 TMEM8BA6NDV4 472 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 SRRM3A6NNA2 597 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-217ENST00000641455 hCG_1984214I3L0E3 225 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 TM4SF5O14894 197 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 EFEMP2O95967 443 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 CEBPBP17676 345 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 SFNP31947 248 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 CLK2P49760 499 aaKnown RBP8.77□□□□□ -1.01
PHGDH-217ENST00000641455 RING1Q06587 406 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 ZNF252P-AS1Q0IIN9 211 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 LRRC32Q14392 662 aa8.77□□□□□ -1.01
PHGDH-217ENST00000641455 AXDND1Q5T1B0 1012 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms