RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 ARHGAP20Q9P2F6 1191 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 INTUQ9ULD6 942 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 TNFSF13BQ9Y275 285 aa10.54□□□□□ -0.72
PHGDH-215ENST00000641371 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-215ENST00000641371 SMIM35A0A1B0GVV1 85 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 BTNL10A8MVZ5 291 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 EPHB6O15197 1021 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 PJA2O43164 708 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 DYNC1LI2O43237 492 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-215ENST00000641371 IL18RAPO95256 599 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 TRIM49P0CI25 452 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 TRIM49CP0CI26 452 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 GTF2F1P35269 517 aaKnown RBP eCLIP10.53□□□□□ -0.72
PHGDH-215ENST00000641371 EIF4A3P38919 411 aaKnown RBP10.53□□□□□ -0.72
PHGDH-215ENST00000641371 SOX10P56693 466 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 GNG11P61952 73 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 NKX3-2P78367 333 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 LACTBP83111 547 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-215ENST00000641371 PRPF4BQ13523 1007 aaKnown RBP10.53□□□□□ -0.72
PHGDH-215ENST00000641371 MTF1Q14872 753 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 GRIK4Q16099 956 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 ASTE1Q2TB18 679 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-215ENST00000641371 DEFB115Q30KQ5 88 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 CBWD6Q4V339 395 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 WDR44Q5JSH3 913 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 CBWD3Q5JTY5 395 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 CBWD5Q5RIA9 395 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 DPY19L2P1Q6NXN4 242 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 PPP1R2P3Q6NXS1 205 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 MTHFD1LQ6UB35 978 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 PAXIP1Q6ZW49 1069 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-215ENST00000641371 RHPN2Q8IUC4 686 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 CBWD2Q8IUF1 395 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 WDR49Q8IV35 697 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 BRSK2Q8IWQ3 736 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 CCDC155Q8N6L0 562 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 MYRIPQ8NFW9 859 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 TRIM58Q8NG06 486 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 NT5C1BQ96P26 610 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 ALS2CR12Q96Q35 445 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 CGRRF1Q99675 332 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 FAM213AQ9BRX8 229 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 DESI2Q9BSY9 194 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 IMPG2Q9BZV3 1241 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 RNPEPQ9H4A4 650 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 SIX2Q9NPC8 291 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 RBAKQ9NYW8 714 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-215ENST00000641371 DNAJC12Q9UKB3 198 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 AKT3Q9Y243 479 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 FHOD1Q9Y613 1164 aa10.53□□□□□ -0.72
PHGDH-215ENST00000641371 ANO9A1A5B4 782 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 CTAGE9A4FU28 777 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 LRRIQ3A6PVS8 624 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-215ENST00000641371 F8VZ95 297 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 INO80B-WBP1J3KQ70 363 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 HAS3O00219 553 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 ADRB2P07550 413 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 SRGAP2CP0DJJ0 459 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 MCF2P10911 925 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 CYP2B6P20813 491 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 PROZP22891 400 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 TBXAS1P24557 533 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-215ENST00000641371 AXLP30530 894 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 MAP2K2P36507 400 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 MAGEA1P43355 309 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 PSMC4P43686 418 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 GCLMP48507 274 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 BPIFB4P59827 614 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 GCNT1Q02742 428 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 PPP3CAQ08209 521 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 TMEM132AQ24JP5 1023 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 CCDC122Q5T0U0 273 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 ATF7IP2Q5U623 682 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 HGSNATQ68CP4 663 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 IQCEQ6IPM2 695 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 SYT10Q6XYQ8 523 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 NT5DC4Q86YG4 428 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 CD302Q8IX05 232 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 NME8Q8N427 588 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 LRRC71Q8N4P6 559 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 ACRBPQ8NEB7 543 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 ZNF592Q92610 1267 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 SAAL1Q96ER3 474 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 NLRP4Q96MN2 994 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 TSPAN18Q96SJ8 248 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 ADPGKQ9BRR6 497 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 TCHPQ9BT92 498 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 TARS2Q9BW92 718 aaKnown RBP10.52□□□□□ -0.73
PHGDH-215ENST00000641371 TMEM117Q9H0C3 514 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 FAM124BQ9H5Z6 455 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-215ENST00000641371 L2HGDHQ9H9P8 463 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 RAB20Q9NX57 234 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 DNAI1Q9UI46 699 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 PCDHA13Q9Y5I0 950 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-215ENST00000641371 CNTNAP2Q9UHC6 1331 aa10.52□□□□□ -0.73
PHGDH-215ENST00000641371 MBLAC1A4D2B0 266 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-215ENST00000641371 GOLGA8IPA6NC78 632 aa10.51□□□□□ -0.73
PHGDH-215ENST00000641371 GOLGA8JA6NMD2 632 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms