RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 TMEM175Q9BSA9 504 aa9.18□□□□□ -0.94
SCARB2-226ENST00000640916 DSCC1Q9BVC3 393 aa9.18□□□□□ -0.94
SCARB2-226ENST00000640916 CNNM2Q9H8M5 875 aa9.18□□□□□ -0.94
SCARB2-226ENST00000640916 LY9Q9HBG7 655 aa9.18□□□□□ -0.94
SCARB2-226ENST00000640916 FAM105AQ9NUU6 356 aa9.18□□□□□ -0.94
SCARB2-226ENST00000640916 STK39Q9UEW8 545 aa9.18□□□□□ -0.94
SCARB2-226ENST00000640916 DPP7Q9UHL4 492 aa9.18□□□□□ -0.94
SCARB2-226ENST00000640916 FAN1Q9Y2M0 1017 aa9.18□□□□□ -0.94
SCARB2-226ENST00000640916 LAMA5O15230 3695 aa9.18□□□□□ -0.94
SCARB2-226ENST00000640916 PDCD11Q14690 1871 aaKnown RBP9.17□□□□□ -0.94
SCARB2-226ENST00000640916 FLNBO75369 2602 aaKnown RBP9.17□□□□□ -0.94
SCARB2-226ENST00000640916 CYSRT1A8MQ03 144 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 CHURC1-FNTBB4DL54 471 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 K7ESF4 209 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 NRG2O14511 850 aaPredicted RBP9.17□□□□□ -0.94
SCARB2-226ENST00000640916 GIPC1O14908 333 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 MAGEB2O15479 319 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 URODP06132 367 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 SMARCA1P28370 1054 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 FNTBP49356 437 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 GLUD2P49448 558 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 SATB1Q01826 763 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 CCDC6Q16204 474 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 IMMTQ16891 758 aaKnown RBP9.17□□□□□ -0.94
SCARB2-226ENST00000640916 CEP55Q53EZ4 464 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 SOWAHCQ53LP3 525 aaPredicted RBP9.17□□□□□ -0.94
SCARB2-226ENST00000640916 STPG1Q5TH74 334 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 ZNF852Q6ZMS4 543 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 MTSS1LQ765P7 747 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 MRPL10Q7Z7H8 261 aaKnown RBP9.17□□□□□ -0.94
SCARB2-226ENST00000640916 COLGALT2Q8IYK4 626 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 RRP36Q96EU6 259 aaKnown RBP9.17□□□□□ -0.94
SCARB2-226ENST00000640916 PGBD1Q96JS3 809 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 B3GALT6Q96L58 329 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 IL25Q9H293 177 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 SSX2IPQ9Y2D8 614 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 ADGRG1Q9Y653 693 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 TAF6LQ9Y6J9 622 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 FREM2Q5SZK8 3169 aa9.17□□□□□ -0.94
SCARB2-226ENST00000640916 TMEM8BA6NDV4 472 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 SPDYE3A6NKU9 549 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 IFIT3O14879 490 aaKnown RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 ZNF862O60290 1169 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 FOXD2O60548 495 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 PLEKHA8P1O95397 391 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 ZNF806P0C7X5 589 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 RPL17P18621 184 aaKnown RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 MFAP1P55081 439 aaKnown RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 AASDHQ4L235 1098 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 WDR44Q5JSH3 913 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 TWF2Q6IBS0 349 aaKnown RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 PSAPL1Q6NUJ1 521 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 MIS18BP1Q6P0N0 1132 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 CWC27Q6UX04 472 aaKnown RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 CMTR1Q8N1G2 835 aaKnown RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 IGDCC4Q8TDY8 1250 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 CEP89Q96ST8 783 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 MAP7D2Q96T17 732 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 PHF20Q9BVI0 1012 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 GPR62Q9BZJ7 368 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 C2orf42Q9NWW7 574 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 MIOSQ9NXC5 875 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 FNIP2Q9P278 1114 aa9.16□□□□□ -0.94
SCARB2-226ENST00000640916 PRG3Q9Y2Y8 225 aaPredicted RBP9.16□□□□□ -0.94
SCARB2-226ENST00000640916 VWA8A3KMH1 1905 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 BPTFQ12830 3046 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 IGLV3-22A0A075B6J6 115 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 A0A087WZ62 844 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 hCG_1642624A0A1W2PR95 340 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 FAM86B1E9PN63 330 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 POMCP01189 267 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 FAM86B2P0C5J1 330 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 CHRNB1P11230 501 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 SKIP12755 728 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 KIF5BP33176 963 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 CCR3P51677 355 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 ANTXR2P58335 489 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 DSC1Q08554 894 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 TARBP2Q15633 366 aaKnown RBP9.15□□□□□ -0.94
SCARB2-226ENST00000640916 PLA2G2CQ5R387 149 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 UBXN11Q5T124 520 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 ELMSAN1Q6PJG2 1045 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 GLYCTKQ8IVS8 523 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 NPAS3Q8IXF0 933 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 CKAP2LQ8IYA6 745 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 NLRP7Q8WX94 980 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 MAP3K14Q99558 947 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 FDXACB1Q9BRP7 624 aaPredicted RBP9.15□□□□□ -0.94
SCARB2-226ENST00000640916 ARRDC1-AS1Q9H2J1 176 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 LMAN1LQ9HAT1 526 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 HCFC1R1Q9NWW0 138 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 FBXW11Q9UKB1 542 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 NDRG2Q9UN36 371 aaKnown RBP9.15□□□□□ -0.94
SCARB2-226ENST00000640916 CEP131Q9UPN4 1083 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 MRPS17Q9Y2R5 130 aaKnown RBP9.15□□□□□ -0.94
SCARB2-226ENST00000640916 PCDHB2Q9Y5E7 798 aa9.15□□□□□ -0.94
SCARB2-226ENST00000640916 AXIN1O15169 862 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 ECI2O75521 394 aa9.14□□□□□ -0.95
SCARB2-226ENST00000640916 PAPSS2O95340 614 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms